Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2269

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2268 and Echvi_2269 are separated by 9 nucleotidesEchvi_2269 and Echvi_2270 overlap by 53 nucleotides Echvi_2268: Echvi_2268 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1, at 2,686,097 to 2,687,185 _2268 Echvi_2269: Echvi_2269 - hypothetical protein, at 2,687,195 to 2,687,881 _2269 Echvi_2270: Echvi_2270 - His Kinase A (phosphoacceptor) domain./7TM diverse intracellular signalling./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 2,687,829 to 2,690,024 _2270 Position (kb) 2687 2688Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2686.242 kb on + strand, within Echvi_2268at 2686.358 kb on + strand, within Echvi_2268at 2686.359 kb on - strand, within Echvi_2268at 2686.381 kb on - strand, within Echvi_2268at 2686.436 kb on + strand, within Echvi_2268at 2686.439 kb on - strand, within Echvi_2268at 2686.439 kb on - strand, within Echvi_2268at 2686.469 kb on + strand, within Echvi_2268at 2686.470 kb on - strand, within Echvi_2268at 2686.470 kb on - strand, within Echvi_2268at 2686.472 kb on - strand, within Echvi_2268at 2686.585 kb on + strand, within Echvi_2268at 2686.586 kb on - strand, within Echvi_2268at 2686.591 kb on + strand, within Echvi_2268at 2686.615 kb on - strand, within Echvi_2268at 2686.616 kb on + strand, within Echvi_2268at 2686.616 kb on + strand, within Echvi_2268at 2686.616 kb on + strand, within Echvi_2268at 2686.617 kb on - strand, within Echvi_2268at 2686.617 kb on - strand, within Echvi_2268at 2686.617 kb on - strand, within Echvi_2268at 2686.617 kb on - strand, within Echvi_2268at 2686.617 kb on - strand, within Echvi_2268at 2686.668 kb on + strand, within Echvi_2268at 2686.668 kb on + strand, within Echvi_2268at 2686.669 kb on - strand, within Echvi_2268at 2686.682 kb on - strand, within Echvi_2268at 2686.695 kb on - strand, within Echvi_2268at 2686.739 kb on - strand, within Echvi_2268at 2686.778 kb on - strand, within Echvi_2268at 2686.802 kb on - strand, within Echvi_2268at 2686.802 kb on - strand, within Echvi_2268at 2686.837 kb on + strand, within Echvi_2268at 2686.837 kb on + strand, within Echvi_2268at 2686.846 kb on + strand, within Echvi_2268at 2686.846 kb on + strand, within Echvi_2268at 2686.846 kb on + strand, within Echvi_2268at 2686.846 kb on + strand, within Echvi_2268at 2686.846 kb on + strand, within Echvi_2268at 2686.846 kb on + strand, within Echvi_2268at 2686.847 kb on - strand, within Echvi_2268at 2686.869 kb on + strand, within Echvi_2268at 2686.870 kb on - strand, within Echvi_2268at 2686.913 kb on + strand, within Echvi_2268at 2686.967 kb on + strand, within Echvi_2268at 2687.025 kb on - strand, within Echvi_2268at 2687.026 kb on + strand, within Echvi_2268at 2687.026 kb on + strand, within Echvi_2268at 2687.026 kb on + strand, within Echvi_2268at 2687.026 kb on + strand, within Echvi_2268at 2687.027 kb on - strand, within Echvi_2268at 2687.029 kb on + strand, within Echvi_2268at 2687.029 kb on + strand, within Echvi_2268at 2687.030 kb on - strand, within Echvi_2268at 2687.045 kb on - strand, within Echvi_2268at 2687.045 kb on - strand, within Echvi_2268at 2687.057 kb on - strand, within Echvi_2268at 2687.057 kb on - strand, within Echvi_2268at 2687.083 kb on - strandat 2687.086 kb on + strandat 2687.098 kb on + strandat 2687.098 kb on + strandat 2687.098 kb on + strandat 2687.099 kb on - strandat 2687.112 kb on - strandat 2687.112 kb on - strandat 2687.116 kb on + strandat 2687.116 kb on + strandat 2687.117 kb on - strandat 2687.152 kb on + strandat 2687.159 kb on + strandat 2687.189 kb on + strandat 2687.189 kb on + strandat 2687.190 kb on - strandat 2687.190 kb on - strandat 2687.224 kb on + strandat 2687.224 kb on + strandat 2687.224 kb on + strandat 2687.225 kb on - strandat 2687.225 kb on - strandat 2687.225 kb on - strandat 2687.226 kb on + strandat 2687.226 kb on + strandat 2687.226 kb on + strandat 2687.226 kb on + strandat 2687.227 kb on - strandat 2687.227 kb on - strandat 2687.227 kb on - strandat 2687.227 kb on - strandat 2687.233 kb on + strandat 2687.233 kb on + strandat 2687.234 kb on - strandat 2687.236 kb on + strandat 2687.236 kb on + strandat 2687.236 kb on + strandat 2687.237 kb on - strandat 2687.237 kb on - strandat 2687.237 kb on - strandat 2687.237 kb on - strandat 2687.242 kb on + strandat 2687.243 kb on - strandat 2687.243 kb on - strandat 2687.245 kb on + strandat 2687.252 kb on + strandat 2687.252 kb on + strandat 2687.252 kb on + strandat 2687.252 kb on + strandat 2687.254 kb on + strandat 2687.285 kb on + strand, within Echvi_2269at 2687.286 kb on - strand, within Echvi_2269at 2687.286 kb on - strand, within Echvi_2269at 2687.286 kb on - strand, within Echvi_2269at 2687.342 kb on + strand, within Echvi_2269at 2687.393 kb on - strand, within Echvi_2269at 2687.404 kb on - strand, within Echvi_2269at 2687.404 kb on - strand, within Echvi_2269at 2687.417 kb on + strand, within Echvi_2269at 2687.417 kb on + strand, within Echvi_2269at 2687.418 kb on - strand, within Echvi_2269at 2687.418 kb on - strand, within Echvi_2269at 2687.418 kb on - strand, within Echvi_2269at 2687.418 kb on - strand, within Echvi_2269at 2687.424 kb on + strand, within Echvi_2269at 2687.425 kb on - strand, within Echvi_2269at 2687.471 kb on + strand, within Echvi_2269at 2687.471 kb on + strand, within Echvi_2269at 2687.471 kb on + strand, within Echvi_2269at 2687.471 kb on + strand, within Echvi_2269at 2687.471 kb on + strand, within Echvi_2269at 2687.472 kb on - strand, within Echvi_2269at 2687.472 kb on - strand, within Echvi_2269at 2687.472 kb on - strand, within Echvi_2269at 2687.472 kb on - strand, within Echvi_2269at 2687.472 kb on - strand, within Echvi_2269at 2687.472 kb on - strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.473 kb on + strand, within Echvi_2269at 2687.474 kb on - strand, within Echvi_2269at 2687.474 kb on - strand, within Echvi_2269at 2687.474 kb on - strand, within Echvi_2269at 2687.474 kb on - strand, within Echvi_2269at 2687.474 kb on - strand, within Echvi_2269at 2687.558 kb on - strand, within Echvi_2269at 2687.565 kb on + strand, within Echvi_2269at 2687.566 kb on - strand, within Echvi_2269at 2687.599 kb on + strand, within Echvi_2269at 2687.636 kb on - strand, within Echvi_2269at 2687.674 kb on - strand, within Echvi_2269at 2687.674 kb on - strand, within Echvi_2269at 2687.689 kb on + strand, within Echvi_2269at 2687.690 kb on - strand, within Echvi_2269at 2687.799 kb on - strand, within Echvi_2269at 2687.855 kb on - strandat 2687.859 kb on + strandat 2687.860 kb on - strandat 2687.860 kb on - strandat 2688.050 kb on - strand, within Echvi_2270at 2688.081 kb on - strand, within Echvi_2270at 2688.123 kb on + strand, within Echvi_2270at 2688.124 kb on - strand, within Echvi_2270at 2688.161 kb on + strand, within Echvi_2270at 2688.161 kb on + strand, within Echvi_2270at 2688.201 kb on - strand, within Echvi_2270at 2688.240 kb on + strand, within Echvi_2270at 2688.240 kb on + strand, within Echvi_2270at 2688.240 kb on + strand, within Echvi_2270at 2688.241 kb on - strand, within Echvi_2270at 2688.241 kb on - strand, within Echvi_2270at 2688.241 kb on - strand, within Echvi_2270at 2688.241 kb on - strand, within Echvi_2270at 2688.241 kb on - strand, within Echvi_2270at 2688.241 kb on - strand, within Echvi_2270at 2688.268 kb on + strand, within Echvi_2270at 2688.269 kb on - strand, within Echvi_2270at 2688.287 kb on - strand, within Echvi_2270at 2688.290 kb on + strand, within Echvi_2270at 2688.291 kb on - strand, within Echvi_2270at 2688.313 kb on + strand, within Echvi_2270at 2688.391 kb on - strand, within Echvi_2270at 2688.444 kb on - strand, within Echvi_2270at 2688.444 kb on - strand, within Echvi_2270at 2688.444 kb on - strand, within Echvi_2270at 2688.444 kb on - strand, within Echvi_2270at 2688.446 kb on - strand, within Echvi_2270at 2688.448 kb on - strand, within Echvi_2270at 2688.448 kb on - strand, within Echvi_2270at 2688.477 kb on + strand, within Echvi_2270at 2688.535 kb on - strand, within Echvi_2270at 2688.535 kb on - strand, within Echvi_2270at 2688.562 kb on + strand, within Echvi_2270at 2688.563 kb on - strand, within Echvi_2270at 2688.622 kb on + strand, within Echvi_2270at 2688.655 kb on + strand, within Echvi_2270at 2688.701 kb on + strand, within Echvi_2270at 2688.721 kb on + strand, within Echvi_2270at 2688.721 kb on + strand, within Echvi_2270at 2688.722 kb on - strand, within Echvi_2270at 2688.744 kb on + strand, within Echvi_2270at 2688.745 kb on - strand, within Echvi_2270at 2688.745 kb on - strand, within Echvi_2270at 2688.745 kb on - strand, within Echvi_2270at 2688.860 kb on + strand, within Echvi_2270at 2688.861 kb on - strand, within Echvi_2270

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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2,686,242 + Echvi_2268 0.13 -1.1
2,686,358 + Echvi_2268 0.24 -4.1
2,686,359 - Echvi_2268 0.24 -3.7
2,686,381 - Echvi_2268 0.26 +1.4
2,686,436 + Echvi_2268 0.31 -0.2
2,686,439 - Echvi_2268 0.31 -3.3
2,686,439 - Echvi_2268 0.31 -2.9
2,686,469 + Echvi_2268 0.34 -2.5
2,686,470 - Echvi_2268 0.34 -0.2
2,686,470 - Echvi_2268 0.34 -2.8
2,686,472 - Echvi_2268 0.34 -0.2
2,686,585 + Echvi_2268 0.45 -2.3
2,686,586 - Echvi_2268 0.45 -1.7
2,686,591 + Echvi_2268 0.45 -3.8
2,686,615 - Echvi_2268 0.48 -1.0
2,686,616 + Echvi_2268 0.48 -0.7
2,686,616 + Echvi_2268 0.48 -1.4
2,686,616 + Echvi_2268 0.48 -1.3
2,686,617 - Echvi_2268 0.48 -2.7
2,686,617 - Echvi_2268 0.48 -1.0
2,686,617 - Echvi_2268 0.48 -0.4
2,686,617 - Echvi_2268 0.48 -2.3
2,686,617 - Echvi_2268 0.48 -0.7
2,686,668 + Echvi_2268 0.52 -2.8
2,686,668 + Echvi_2268 0.52 -1.0
2,686,669 - Echvi_2268 0.53 -1.0
2,686,682 - Echvi_2268 0.54 -2.7
2,686,695 - Echvi_2268 0.55 -2.1
2,686,739 - Echvi_2268 0.59 -3.8
2,686,778 - Echvi_2268 0.63 -1.2
2,686,802 - Echvi_2268 0.65 -3.4
2,686,802 - Echvi_2268 0.65 -0.3
2,686,837 + Echvi_2268 0.68 -1.2
2,686,837 + Echvi_2268 0.68 -1.9
2,686,846 + Echvi_2268 0.69 -0.6
2,686,846 + Echvi_2268 0.69 -1.7
2,686,846 + Echvi_2268 0.69 -2.5
2,686,846 + Echvi_2268 0.69 -0.3
2,686,846 + Echvi_2268 0.69 -3.8
2,686,846 + Echvi_2268 0.69 -0.7
2,686,847 - Echvi_2268 0.69 -1.8
2,686,869 + Echvi_2268 0.71 -0.7
2,686,870 - Echvi_2268 0.71 -3.6
2,686,913 + Echvi_2268 0.75 -2.6
2,686,967 + Echvi_2268 0.80 -2.3
2,687,025 - Echvi_2268 0.85 -1.4
2,687,026 + Echvi_2268 0.85 -1.2
2,687,026 + Echvi_2268 0.85 -1.3
2,687,026 + Echvi_2268 0.85 -2.4
2,687,026 + Echvi_2268 0.85 -3.0
2,687,027 - Echvi_2268 0.85 -1.0
2,687,029 + Echvi_2268 0.86 -2.2
2,687,029 + Echvi_2268 0.86 +1.1
2,687,030 - Echvi_2268 0.86 -1.3
2,687,045 - Echvi_2268 0.87 +2.1
2,687,045 - Echvi_2268 0.87 -1.4
2,687,057 - Echvi_2268 0.88 -1.4
2,687,057 - Echvi_2268 0.88 -3.1
2,687,083 - +0.6
2,687,086 + -0.7
2,687,098 + -1.2
2,687,098 + -1.8
2,687,098 + +1.0
2,687,099 - +1.1
2,687,112 - -0.7
2,687,112 - -0.7
2,687,116 + -1.6
2,687,116 + -1.0
2,687,117 - -0.6
2,687,152 + -1.7
2,687,159 + -2.4
2,687,189 + -1.9
2,687,189 + -0.8
2,687,190 - -0.5
2,687,190 - -2.2
2,687,224 + -0.7
2,687,224 + -0.5
2,687,224 + -1.5
2,687,225 - -2.2
2,687,225 - -1.8
2,687,225 - -1.4
2,687,226 + -2.0
2,687,226 + +0.6
2,687,226 + -2.5
2,687,226 + +0.7
2,687,227 - -0.1
2,687,227 - -0.7
2,687,227 - -2.6
2,687,227 - -3.0
2,687,233 + -1.4
2,687,233 + -3.0
2,687,234 - -3.3
2,687,236 + -0.1
2,687,236 + -3.1
2,687,236 + -0.6
2,687,237 - -1.0
2,687,237 - -0.3
2,687,237 - -2.0
2,687,237 - -1.7
2,687,242 + -0.9
2,687,243 - -0.5
2,687,243 - -1.3
2,687,245 + -0.9
2,687,252 + -0.2
2,687,252 + -1.7
2,687,252 + -0.2
2,687,252 + -3.0
2,687,254 + +1.1
2,687,285 + Echvi_2269 0.13 +0.1
2,687,286 - Echvi_2269 0.13 -3.2
2,687,286 - Echvi_2269 0.13 -1.3
2,687,286 - Echvi_2269 0.13 -1.0
2,687,342 + Echvi_2269 0.21 -0.9
2,687,393 - Echvi_2269 0.29 -2.0
2,687,404 - Echvi_2269 0.30 -1.3
2,687,404 - Echvi_2269 0.30 -0.5
2,687,417 + Echvi_2269 0.32 -1.2
2,687,417 + Echvi_2269 0.32 +0.7
2,687,418 - Echvi_2269 0.32 -2.0
2,687,418 - Echvi_2269 0.32 +0.2
2,687,418 - Echvi_2269 0.32 +1.4
2,687,418 - Echvi_2269 0.32 -2.5
2,687,424 + Echvi_2269 0.33 -2.7
2,687,425 - Echvi_2269 0.33 -1.9
2,687,471 + Echvi_2269 0.40 -0.0
2,687,471 + Echvi_2269 0.40 -2.5
2,687,471 + Echvi_2269 0.40 -2.8
2,687,471 + Echvi_2269 0.40 -1.7
2,687,471 + Echvi_2269 0.40 -2.0
2,687,472 - Echvi_2269 0.40 -0.5
2,687,472 - Echvi_2269 0.40 -1.4
2,687,472 - Echvi_2269 0.40 +0.3
2,687,472 - Echvi_2269 0.40 -3.1
2,687,472 - Echvi_2269 0.40 -1.2
2,687,472 - Echvi_2269 0.40 -1.1
2,687,473 + Echvi_2269 0.40 -1.8
2,687,473 + Echvi_2269 0.40 -0.8
2,687,473 + Echvi_2269 0.40 -3.5
2,687,473 + Echvi_2269 0.40 -1.4
2,687,473 + Echvi_2269 0.40 -2.0
2,687,473 + Echvi_2269 0.40 -0.2
2,687,473 + Echvi_2269 0.40 -2.0
2,687,473 + Echvi_2269 0.40 -1.8
2,687,474 - Echvi_2269 0.41 -0.0
2,687,474 - Echvi_2269 0.41 -1.3
2,687,474 - Echvi_2269 0.41 -2.2
2,687,474 - Echvi_2269 0.41 -0.9
2,687,474 - Echvi_2269 0.41 -0.4
2,687,558 - Echvi_2269 0.53 -1.2
2,687,565 + Echvi_2269 0.54 -2.4
2,687,566 - Echvi_2269 0.54 -0.9
2,687,599 + Echvi_2269 0.59 -1.2
2,687,636 - Echvi_2269 0.64 -1.0
2,687,674 - Echvi_2269 0.70 -0.8
2,687,674 - Echvi_2269 0.70 -0.7
2,687,689 + Echvi_2269 0.72 -2.5
2,687,690 - Echvi_2269 0.72 -0.3
2,687,799 - Echvi_2269 0.88 -2.8
2,687,855 - -1.6
2,687,859 + -0.1
2,687,860 - -0.9
2,687,860 - -1.3
2,688,050 - Echvi_2270 0.10 +3.2
2,688,081 - Echvi_2270 0.11 +1.5
2,688,123 + Echvi_2270 0.13 +0.8
2,688,124 - Echvi_2270 0.13 +0.5
2,688,161 + Echvi_2270 0.15 -0.7
2,688,161 + Echvi_2270 0.15 -0.1
2,688,201 - Echvi_2270 0.17 +1.9
2,688,240 + Echvi_2270 0.19 +0.1
2,688,240 + Echvi_2270 0.19 -0.4
2,688,240 + Echvi_2270 0.19 -0.4
2,688,241 - Echvi_2270 0.19 +1.5
2,688,241 - Echvi_2270 0.19 +1.1
2,688,241 - Echvi_2270 0.19 +1.2
2,688,241 - Echvi_2270 0.19 +1.8
2,688,241 - Echvi_2270 0.19 +1.1
2,688,241 - Echvi_2270 0.19 +3.6
2,688,268 + Echvi_2270 0.20 -0.8
2,688,269 - Echvi_2270 0.20 +2.8
2,688,287 - Echvi_2270 0.21 -2.1
2,688,290 + Echvi_2270 0.21 +0.1
2,688,291 - Echvi_2270 0.21 +1.8
2,688,313 + Echvi_2270 0.22 -1.2
2,688,391 - Echvi_2270 0.26 +1.9
2,688,444 - Echvi_2270 0.28 +1.1
2,688,444 - Echvi_2270 0.28 +3.4
2,688,444 - Echvi_2270 0.28 +0.6
2,688,444 - Echvi_2270 0.28 +0.9
2,688,446 - Echvi_2270 0.28 +1.4
2,688,448 - Echvi_2270 0.28 +0.8
2,688,448 - Echvi_2270 0.28 +1.5
2,688,477 + Echvi_2270 0.30 +2.1
2,688,535 - Echvi_2270 0.32 +1.1
2,688,535 - Echvi_2270 0.32 +1.3
2,688,562 + Echvi_2270 0.33 +1.6
2,688,563 - Echvi_2270 0.33 -0.1
2,688,622 + Echvi_2270 0.36 +2.5
2,688,655 + Echvi_2270 0.38 +2.5
2,688,701 + Echvi_2270 0.40 +1.6
2,688,721 + Echvi_2270 0.41 +2.0
2,688,721 + Echvi_2270 0.41 +1.8
2,688,722 - Echvi_2270 0.41 +0.8
2,688,744 + Echvi_2270 0.42 +0.4
2,688,745 - Echvi_2270 0.42 +3.4
2,688,745 - Echvi_2270 0.42 +0.5
2,688,745 - Echvi_2270 0.42 +2.0
2,688,860 + Echvi_2270 0.47 -0.3
2,688,861 - Echvi_2270 0.47 +2.0

Or see this region's nucleotide sequence