Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2268

Experiment: L-tyrosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (N)
2,685,118	+		Echvi_2266	0.89	-2.3
2,685,119	-		Echvi_2266	0.90	-3.7
2,685,119	-		Echvi_2266	0.90	-2.3
2,685,122	+		Echvi_2266	0.90	-3.7
2,685,123	-		Echvi_2266	0.90	-1.4
2,685,127	-				-1.3
2,685,150	+				-0.7
2,685,171	-				-1.0
2,685,171	-				+1.5
2,685,223	+				-3.5
2,685,241	-				-1.5
2,685,243	+				-1.0
2,685,243	+				-2.4
2,685,244	-				-1.8
2,685,244	-				-0.3
2,685,244	-				-0.7
2,685,248	+				+0.7
2,685,249	-				-0.0
2,685,268	+				-1.1
2,685,268	+				-1.4
2,685,285	+				-0.7
2,685,334	-				-1.1
2,685,343	+				+1.3
2,685,354	-				+0.0
2,685,362	+				-0.2
2,685,397	+				+0.7
2,685,506	+		Echvi_2267	0.27	-2.8
2,685,506	+		Echvi_2267	0.27	-2.1
2,685,506	+		Echvi_2267	0.27	-2.8
2,685,506	+		Echvi_2267	0.27	+0.1
2,685,507	-		Echvi_2267	0.28	-2.4
2,685,507	-				+2.1
2,685,507	-		Echvi_2267	0.28	-1.5
2,685,539	+		Echvi_2267	0.34	+1.1
2,685,539	+		Echvi_2267	0.34	-0.8
2,685,539	+		Echvi_2267	0.34	-0.3
2,685,540	-		Echvi_2267	0.35	-1.3
2,685,540	-		Echvi_2267	0.35	-1.8
2,685,540	-		Echvi_2267	0.35	-1.6
2,685,542	-		Echvi_2267	0.35	-3.1
2,685,542	-		Echvi_2267	0.35	-2.7
2,685,542	-		Echvi_2267	0.35	+1.1
2,685,542	-		Echvi_2267	0.35	-2.5
2,685,542	-		Echvi_2267	0.35	-1.7
2,685,580	-		Echvi_2267	0.43	-1.5
2,685,580	-		Echvi_2267	0.43	-2.5
2,685,585	+		Echvi_2267	0.44	-2.8
2,685,586	-		Echvi_2267	0.44	-3.4
2,685,586	-		Echvi_2267	0.44	-0.2
2,685,712	+		Echvi_2267	0.71	-1.3
2,685,713	-		Echvi_2267	0.71	-2.2
2,685,772	-		Echvi_2267	0.84	-1.0
2,685,872	-				-2.2
2,685,886	-				+0.6
2,685,897	-				+0.9
2,685,931	-				+1.1
2,685,933	-				+1.9
2,685,935	+				-3.2
2,685,935	+				-2.0
2,685,941	+				+0.3
2,685,949	+				-1.4
2,686,058	+				+2.8
2,686,058	+				+1.8
2,686,067	+				+2.1
2,686,068	-				-2.9
2,686,072	-				-2.4
2,686,072	-				-1.8
2,686,076	-				-2.3
2,686,089	+				+2.3
2,686,133	+				-0.2
2,686,133	+				-0.8
2,686,133	+				+0.7
2,686,134	-				+0.2
2,686,134	-				-0.4
2,686,134	-				-1.6
2,686,147	+				-4.2
2,686,185	+				-1.0
2,686,186	-				-0.6
2,686,242	+		Echvi_2268	0.13	-1.1
2,686,358	+		Echvi_2268	0.24	-4.1
2,686,359	-		Echvi_2268	0.24	-3.7
2,686,381	-		Echvi_2268	0.26	+1.4
2,686,436	+		Echvi_2268	0.31	-0.2
2,686,439	-		Echvi_2268	0.31	-3.3
2,686,439	-		Echvi_2268	0.31	-2.9
2,686,469	+		Echvi_2268	0.34	-2.5
2,686,470	-		Echvi_2268	0.34	-0.2
2,686,470	-		Echvi_2268	0.34	-2.8
2,686,472	-		Echvi_2268	0.34	-0.2
2,686,585	+		Echvi_2268	0.45	-2.3
2,686,586	-		Echvi_2268	0.45	-1.7
2,686,591	+		Echvi_2268	0.45	-3.8
2,686,615	-		Echvi_2268	0.48	-1.0
2,686,616	+		Echvi_2268	0.48	-0.7
2,686,616	+		Echvi_2268	0.48	-1.4
2,686,616	+		Echvi_2268	0.48	-1.3
2,686,617	-		Echvi_2268	0.48	-2.7
2,686,617	-		Echvi_2268	0.48	-1.0
2,686,617	-		Echvi_2268	0.48	-0.4
2,686,617	-		Echvi_2268	0.48	-2.3
2,686,617	-		Echvi_2268	0.48	-0.7
2,686,668	+		Echvi_2268	0.52	-2.8
2,686,668	+		Echvi_2268	0.52	-1.0
2,686,669	-		Echvi_2268	0.53	-1.0
2,686,682	-		Echvi_2268	0.54	-2.7
2,686,695	-		Echvi_2268	0.55	-2.1
2,686,739	-		Echvi_2268	0.59	-3.8
2,686,778	-		Echvi_2268	0.63	-1.2
2,686,802	-		Echvi_2268	0.65	-3.4
2,686,802	-		Echvi_2268	0.65	-0.3
2,686,837	+		Echvi_2268	0.68	-1.2
2,686,837	+		Echvi_2268	0.68	-1.9
2,686,846	+		Echvi_2268	0.69	-0.6
2,686,846	+		Echvi_2268	0.69	-1.7
2,686,846	+		Echvi_2268	0.69	-2.5
2,686,846	+		Echvi_2268	0.69	-0.3
2,686,846	+		Echvi_2268	0.69	-3.8
2,686,846	+		Echvi_2268	0.69	-0.7
2,686,847	-		Echvi_2268	0.69	-1.8
2,686,869	+		Echvi_2268	0.71	-0.7
2,686,870	-		Echvi_2268	0.71	-3.6
2,686,913	+		Echvi_2268	0.75	-2.6
2,686,967	+		Echvi_2268	0.80	-2.3
2,687,025	-		Echvi_2268	0.85	-1.4
2,687,026	+		Echvi_2268	0.85	-1.2
2,687,026	+		Echvi_2268	0.85	-1.3
2,687,026	+		Echvi_2268	0.85	-2.4
2,687,026	+		Echvi_2268	0.85	-3.0
2,687,027	-		Echvi_2268	0.85	-1.0
2,687,029	+		Echvi_2268	0.86	-2.2
2,687,029	+		Echvi_2268	0.86	+1.1
2,687,030	-		Echvi_2268	0.86	-1.3
2,687,045	-		Echvi_2268	0.87	+2.1
2,687,045	-		Echvi_2268	0.87	-1.4
2,687,057	-		Echvi_2268	0.88	-1.4
2,687,057	-		Echvi_2268	0.88	-3.1
2,687,083	-				+0.6
2,687,086	+				-0.7
2,687,098	+				-1.2
2,687,098	+				-1.8
2,687,098	+				+1.0
2,687,099	-				+1.1
2,687,112	-				-0.7
2,687,112	-				-0.7
2,687,116	+				-1.6
2,687,116	+				-1.0
2,687,117	-				-0.6
2,687,152	+				-1.7
2,687,159	+				-2.4
2,687,189	+				-1.9
2,687,189	+				-0.8
2,687,190	-				-0.5
2,687,190	-				-2.2
2,687,224	+				-0.7
2,687,224	+				-0.5
2,687,224	+				-1.5
2,687,225	-				-2.2
2,687,225	-				-1.8
2,687,225	-				-1.4
2,687,226	+				-2.0
2,687,226	+				+0.6
2,687,226	+				-2.5
2,687,226	+				+0.7
2,687,227	-				-0.1
2,687,227	-				-0.7
2,687,227	-				-2.6
2,687,227	-				-3.0
2,687,233	+				-1.4
2,687,233	+				-3.0
2,687,234	-				-3.3
2,687,236	+				-0.1
2,687,236	+				-3.1
2,687,236	+				-0.6
2,687,237	-				-1.0
2,687,237	-				-0.3
2,687,237	-				-2.0
2,687,237	-				-1.7
2,687,242	+				-0.9
2,687,243	-				-0.5
2,687,243	-				-1.3
2,687,245	+				-0.9
2,687,252	+				-0.2
2,687,252	+				-1.7
2,687,252	+				-0.2
2,687,252	+				-3.0
2,687,254	+				+1.1
2,687,285	+		Echvi_2269	0.13	+0.1
2,687,286	-		Echvi_2269	0.13	-3.2
2,687,286	-		Echvi_2269	0.13	-1.3
2,687,286	-		Echvi_2269	0.13	-1.0
2,687,342	+		Echvi_2269	0.21	-0.9
2,687,393	-		Echvi_2269	0.29	-2.0
2,687,404	-		Echvi_2269	0.30	-1.3
2,687,404	-		Echvi_2269	0.30	-0.5
2,687,417	+		Echvi_2269	0.32	-1.2
2,687,417	+		Echvi_2269	0.32	+0.7
2,687,418	-		Echvi_2269	0.32	-2.0
2,687,418	-		Echvi_2269	0.32	+0.2
2,687,418	-		Echvi_2269	0.32	+1.4
2,687,418	-		Echvi_2269	0.32	-2.5
2,687,424	+		Echvi_2269	0.33	-2.7
2,687,425	-		Echvi_2269	0.33	-1.9
2,687,471	+		Echvi_2269	0.40	-0.0
2,687,471	+		Echvi_2269	0.40	-2.5
2,687,471	+		Echvi_2269	0.40	-2.8
2,687,471	+		Echvi_2269	0.40	-1.7
2,687,471	+		Echvi_2269	0.40	-2.0
2,687,472	-		Echvi_2269	0.40	-0.5
2,687,472	-		Echvi_2269	0.40	-1.4
2,687,472	-		Echvi_2269	0.40	+0.3
2,687,472	-		Echvi_2269	0.40	-3.1
2,687,472	-		Echvi_2269	0.40	-1.2
2,687,472	-		Echvi_2269	0.40	-1.1
2,687,473	+		Echvi_2269	0.40	-1.8
2,687,473	+		Echvi_2269	0.40	-0.8
2,687,473	+		Echvi_2269	0.40	-3.5
2,687,473	+		Echvi_2269	0.40	-1.4
2,687,473	+		Echvi_2269	0.40	-2.0
2,687,473	+		Echvi_2269	0.40	-0.2
2,687,473	+		Echvi_2269	0.40	-2.0
2,687,473	+		Echvi_2269	0.40	-1.8
2,687,474	-		Echvi_2269	0.41	-0.0
2,687,474	-		Echvi_2269	0.41	-1.3
2,687,474	-		Echvi_2269	0.41	-2.2
2,687,474	-		Echvi_2269	0.41	-0.9
2,687,474	-		Echvi_2269	0.41	-0.4
2,687,558	-		Echvi_2269	0.53	-1.2
2,687,565	+		Echvi_2269	0.54	-2.4
2,687,566	-		Echvi_2269	0.54	-0.9
2,687,599	+		Echvi_2269	0.59	-1.2
2,687,636	-		Echvi_2269	0.64	-1.0
2,687,674	-		Echvi_2269	0.70	-0.8
2,687,674	-		Echvi_2269	0.70	-0.7
2,687,689	+		Echvi_2269	0.72	-2.5
2,687,690	-		Echvi_2269	0.72	-0.3
2,687,799	-		Echvi_2269	0.88	-2.8
2,687,855	-				-1.6
2,687,859	+				-0.1
2,687,860	-				-0.9
2,687,860	-				-1.3
2,688,050	-		Echvi_2270	0.10	+3.2
2,688,081	-		Echvi_2270	0.11	+1.5
2,688,123	+		Echvi_2270	0.13	+0.8
2,688,124	-		Echvi_2270	0.13	+0.5
2,688,161	+		Echvi_2270	0.15	-0.7
2,688,161	+		Echvi_2270	0.15	-0.1