Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1773 and Echvi_1774 are separated by 32 nucleotides Echvi_1774 and Echvi_1775 are separated by 782 nucleotides
Echvi_1773: Echvi_1773 - ribonucleoside-diphosphate reductase, alpha subunit, at 2,084,009 to 2,086,408
_1773
Echvi_1774: Echvi_1774 - Ribonucleotide reductase, beta subunit, at 2,086,441 to 2,087,424
_1774
Echvi_1775: Echvi_1775 - ribosomal protein L21, at 2,088,207 to 2,088,518
_1775
Position (kb)
2086
2087
2088 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2087.467 kb on - strand at 2087.559 kb on - strand at 2087.647 kb on - strand at 2087.649 kb on - strand at 2087.755 kb on + strand at 2087.955 kb on + strand at 2087.955 kb on + strand at 2087.955 kb on + strand at 2087.955 kb on + strand at 2087.955 kb on + strand at 2087.956 kb on - strand at 2087.956 kb on - strand at 2087.956 kb on - strand at 2087.968 kb on - strand at 2088.002 kb on - strand at 2088.002 kb on - strand at 2088.032 kb on + strand at 2088.033 kb on - strand at 2088.033 kb on - strand at 2088.033 kb on - strand at 2088.034 kb on + strand at 2088.035 kb on - strand at 2088.047 kb on + strand at 2088.048 kb on - strand at 2088.093 kb on + strand at 2088.093 kb on + strand at 2088.093 kb on + strand at 2088.099 kb on + strand at 2088.099 kb on + strand at 2088.100 kb on - strand at 2088.100 kb on - strand at 2088.100 kb on - strand at 2088.101 kb on + strand at 2088.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 2,087,467 - -0.5 2,087,559 - +0.4 2,087,647 - -0.7 2,087,649 - +0.8 2,087,755 + -0.7 2,087,955 + +0.4 2,087,955 + +1.2 2,087,955 + +1.2 2,087,955 + -0.2 2,087,955 + +0.1 2,087,956 - -0.9 2,087,956 - +1.5 2,087,956 - +0.5 2,087,968 - -0.6 2,088,002 - -2.8 2,088,002 - +0.8 2,088,032 + +1.1 2,088,033 - +0.9 2,088,033 - +1.1 2,088,033 - -0.0 2,088,034 + +0.7 2,088,035 - +1.3 2,088,047 + -1.8 2,088,048 - +0.7 2,088,093 + +0.1 2,088,093 + -0.7 2,088,093 + +0.4 2,088,099 + +1.3 2,088,099 + +1.3 2,088,100 - +1.3 2,088,100 - -3.4 2,088,100 - -0.1 2,088,101 + -0.9 2,088,102 - -0.7
Or see this region's nucleotide sequence