Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1632

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1631 and Echvi_1632 are separated by 247 nucleotides Echvi_1631: Echvi_1631 - Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins, at 1,883,432 to 1,884,790 _1631 Echvi_1632: Echvi_1632 - Endoglucanase, at 1,885,038 to 1,886,009 _1632 Position (kb) 1885 1886 1887Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1884.049 kb on + strand, within Echvi_1631at 1884.064 kb on + strand, within Echvi_1631at 1884.073 kb on + strand, within Echvi_1631at 1884.079 kb on + strand, within Echvi_1631at 1884.101 kb on + strand, within Echvi_1631at 1884.102 kb on - strand, within Echvi_1631at 1884.102 kb on - strand, within Echvi_1631at 1884.155 kb on + strand, within Echvi_1631at 1884.200 kb on - strand, within Echvi_1631at 1884.200 kb on - strand, within Echvi_1631at 1884.224 kb on + strand, within Echvi_1631at 1884.224 kb on + strand, within Echvi_1631at 1884.224 kb on + strand, within Echvi_1631at 1884.224 kb on + strand, within Echvi_1631at 1884.224 kb on + strand, within Echvi_1631at 1884.225 kb on - strand, within Echvi_1631at 1884.227 kb on - strand, within Echvi_1631at 1884.449 kb on + strand, within Echvi_1631at 1884.450 kb on - strand, within Echvi_1631at 1884.450 kb on - strand, within Echvi_1631at 1884.476 kb on + strand, within Echvi_1631at 1884.482 kb on + strand, within Echvi_1631at 1884.482 kb on + strand, within Echvi_1631at 1884.482 kb on + strand, within Echvi_1631at 1884.482 kb on + strand, within Echvi_1631at 1884.482 kb on + strand, within Echvi_1631at 1884.483 kb on - strand, within Echvi_1631at 1884.483 kb on - strand, within Echvi_1631at 1884.483 kb on - strand, within Echvi_1631at 1884.483 kb on - strand, within Echvi_1631at 1884.487 kb on + strand, within Echvi_1631at 1884.531 kb on - strand, within Echvi_1631at 1884.531 kb on - strand, within Echvi_1631at 1884.577 kb on - strand, within Echvi_1631at 1884.641 kb on + strand, within Echvi_1631at 1884.644 kb on + strand, within Echvi_1631at 1884.645 kb on - strand, within Echvi_1631at 1884.645 kb on - strand, within Echvi_1631at 1884.645 kb on - strand, within Echvi_1631at 1884.759 kb on + strandat 1884.760 kb on - strandat 1884.791 kb on + strandat 1884.791 kb on + strandat 1884.791 kb on + strandat 1884.792 kb on - strandat 1884.792 kb on - strandat 1884.792 kb on - strandat 1884.792 kb on - strandat 1884.792 kb on - strandat 1884.835 kb on + strandat 1884.941 kb on + strandat 1884.969 kb on + strandat 1884.969 kb on + strandat 1884.970 kb on - strandat 1885.041 kb on + strandat 1885.042 kb on - strandat 1885.042 kb on - strandat 1885.053 kb on + strandat 1885.054 kb on - strandat 1885.085 kb on + strandat 1885.085 kb on + strandat 1885.086 kb on - strandat 1885.239 kb on + strand, within Echvi_1632at 1885.250 kb on + strand, within Echvi_1632at 1885.251 kb on - strand, within Echvi_1632at 1885.255 kb on + strand, within Echvi_1632at 1885.256 kb on - strand, within Echvi_1632at 1885.473 kb on - strand, within Echvi_1632at 1885.473 kb on - strand, within Echvi_1632at 1885.473 kb on - strand, within Echvi_1632at 1885.477 kb on - strand, within Echvi_1632at 1885.551 kb on + strand, within Echvi_1632at 1885.551 kb on + strand, within Echvi_1632at 1885.551 kb on + strand, within Echvi_1632at 1885.552 kb on - strand, within Echvi_1632at 1885.683 kb on + strand, within Echvi_1632at 1885.683 kb on + strand, within Echvi_1632at 1885.683 kb on + strand, within Echvi_1632at 1885.684 kb on - strand, within Echvi_1632at 1885.685 kb on + strand, within Echvi_1632at 1885.686 kb on - strand, within Echvi_1632at 1885.686 kb on - strand, within Echvi_1632at 1885.698 kb on + strand, within Echvi_1632at 1885.960 kb on + strandat 1885.990 kb on - strandat 1885.994 kb on - strandat 1885.994 kb on - strandat 1886.083 kb on + strandat 1886.084 kb on - strandat 1886.086 kb on - strandat 1886.140 kb on - strandat 1886.223 kb on + strandat 1886.224 kb on - strandat 1886.224 kb on - strandat 1886.225 kb on + strandat 1886.225 kb on + strandat 1886.238 kb on + strandat 1886.262 kb on + strandat 1886.262 kb on + strandat 1886.270 kb on + strandat 1886.271 kb on - strandat 1886.325 kb on + strandat 1886.413 kb on + strandat 1886.471 kb on + strandat 1886.585 kb on + strandat 1886.732 kb on + strandat 1886.732 kb on + strandat 1886.732 kb on + strandat 1886.732 kb on + strandat 1886.733 kb on - strandat 1886.738 kb on - strandat 1886.784 kb on - strandat 1886.784 kb on - strandat 1886.832 kb on + strandat 1886.832 kb on + strandat 1886.836 kb on + strandat 1886.836 kb on + strandat 1886.837 kb on - strandat 1886.844 kb on + strandat 1886.845 kb on - strandat 1886.845 kb on - strandat 1886.845 kb on - strandat 1886.951 kb on + strandat 1886.975 kb on + strandat 1887.009 kb on - strandat 1887.009 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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1,884,049 + Echvi_1631 0.45 +1.8
1,884,064 + Echvi_1631 0.47 -0.6
1,884,073 + Echvi_1631 0.47 -0.4
1,884,079 + Echvi_1631 0.48 -1.1
1,884,101 + Echvi_1631 0.49 +1.3
1,884,102 - Echvi_1631 0.49 +0.2
1,884,102 - Echvi_1631 0.49 -0.8
1,884,155 + Echvi_1631 0.53 +0.7
1,884,200 - Echvi_1631 0.57 -1.6
1,884,200 - Echvi_1631 0.57 -1.6
1,884,224 + Echvi_1631 0.58 +0.7
1,884,224 + Echvi_1631 0.58 -1.2
1,884,224 + Echvi_1631 0.58 -0.1
1,884,224 + Echvi_1631 0.58 -1.4
1,884,224 + Echvi_1631 0.58 -2.4
1,884,225 - Echvi_1631 0.58 +0.7
1,884,227 - Echvi_1631 0.58 +1.1
1,884,449 + Echvi_1631 0.75 +0.1
1,884,450 - Echvi_1631 0.75 +0.2
1,884,450 - Echvi_1631 0.75 +0.4
1,884,476 + Echvi_1631 0.77 -0.6
1,884,482 + Echvi_1631 0.77 +0.5
1,884,482 + Echvi_1631 0.77 -1.8
1,884,482 + Echvi_1631 0.77 -0.4
1,884,482 + Echvi_1631 0.77 +0.5
1,884,482 + Echvi_1631 0.77 +0.1
1,884,483 - Echvi_1631 0.77 -2.0
1,884,483 - Echvi_1631 0.77 -1.0
1,884,483 - Echvi_1631 0.77 +1.5
1,884,483 - Echvi_1631 0.77 +0.7
1,884,487 + Echvi_1631 0.78 -1.0
1,884,531 - Echvi_1631 0.81 +1.1
1,884,531 - Echvi_1631 0.81 +0.3
1,884,577 - Echvi_1631 0.84 +0.1
1,884,641 + Echvi_1631 0.89 -0.2
1,884,644 + Echvi_1631 0.89 -2.7
1,884,645 - Echvi_1631 0.89 -0.0
1,884,645 - Echvi_1631 0.89 +0.8
1,884,645 - Echvi_1631 0.89 -1.6
1,884,759 + -1.3
1,884,760 - -1.9
1,884,791 + -1.0
1,884,791 + -1.5
1,884,791 + +2.1
1,884,792 - +1.4
1,884,792 - -0.5
1,884,792 - -1.8
1,884,792 - -0.1
1,884,792 - +0.6
1,884,835 + +0.5
1,884,941 + +0.1
1,884,969 + +0.8
1,884,969 + -0.1
1,884,970 - -0.2
1,885,041 + -0.1
1,885,042 - +1.2
1,885,042 - -1.0
1,885,053 + +0.3
1,885,054 - -0.9
1,885,085 + +0.4
1,885,085 + +0.6
1,885,086 - -0.2
1,885,239 + Echvi_1632 0.21 +0.8
1,885,250 + Echvi_1632 0.22 -1.6
1,885,251 - Echvi_1632 0.22 +0.2
1,885,255 + Echvi_1632 0.22 +1.3
1,885,256 - Echvi_1632 0.22 -1.4
1,885,473 - Echvi_1632 0.45 -0.4
1,885,473 - Echvi_1632 0.45 +0.9
1,885,473 - Echvi_1632 0.45 +0.9
1,885,477 - Echvi_1632 0.45 +0.8
1,885,551 + Echvi_1632 0.53 +3.1
1,885,551 + Echvi_1632 0.53 +1.2
1,885,551 + Echvi_1632 0.53 +0.6
1,885,552 - Echvi_1632 0.53 -1.5
1,885,683 + Echvi_1632 0.66 +2.1
1,885,683 + Echvi_1632 0.66 -0.3
1,885,683 + Echvi_1632 0.66 +1.6
1,885,684 - Echvi_1632 0.66 +1.7
1,885,685 + Echvi_1632 0.67 +0.6
1,885,686 - Echvi_1632 0.67 +0.8
1,885,686 - Echvi_1632 0.67 -1.1
1,885,698 + Echvi_1632 0.68 +0.8
1,885,960 + +0.4
1,885,990 - -0.1
1,885,994 - -0.2
1,885,994 - -0.6
1,886,083 + -1.4
1,886,084 - +0.0
1,886,086 - +1.8
1,886,140 - -1.2
1,886,223 + -2.6
1,886,224 - -0.7
1,886,224 - -0.1
1,886,225 + -2.6
1,886,225 + -1.5
1,886,238 + -3.5
1,886,262 + -2.8
1,886,262 + -0.7
1,886,270 + -1.1
1,886,271 - +0.9
1,886,325 + -0.7
1,886,413 + +0.5
1,886,471 + -0.4
1,886,585 + -0.5
1,886,732 + -0.9
1,886,732 + -1.1
1,886,732 + +1.0
1,886,732 + -0.2
1,886,733 - +0.5
1,886,738 - +0.3
1,886,784 - -1.1
1,886,784 - -2.0
1,886,832 + +0.6
1,886,832 + +0.9
1,886,836 + -2.1
1,886,836 + -0.7
1,886,837 - -0.5
1,886,844 + +1.5
1,886,845 - -1.6
1,886,845 - -0.7
1,886,845 - +2.1
1,886,951 + -1.1
1,886,975 + -0.1
1,887,009 - -2.3
1,887,009 - -2.0

Or see this region's nucleotide sequence