Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1468

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1466 and Echvi_1467 overlap by 8 nucleotidesEchvi_1467 and Echvi_1468 are separated by 7 nucleotidesEchvi_1468 and Echvi_1469 are separated by 482 nucleotides Echvi_1466: Echvi_1466 - hypothetical protein, at 1,680,538 to 1,681,059 _1466 Echvi_1467: Echvi_1467 - rod shape-determining protein MreC, at 1,681,052 to 1,681,885 _1467 Echvi_1468: Echvi_1468 - cell shape determining protein, MreB/Mrl family, at 1,681,893 to 1,682,921 _1468 Echvi_1469: Echvi_1469 - AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful), at 1,683,404 to 1,684,930 _1469 Position (kb) 1681 1682 1683Strain fitness (log2 ratio) -2 -1 0 1at 1681.119 kb on - strandat 1682.986 kb on - strandat 1683.073 kb on + strandat 1683.074 kb on - strandat 1683.115 kb on + strandat 1683.115 kb on + strandat 1683.116 kb on - strandat 1683.305 kb on + strandat 1683.306 kb on - strandat 1683.310 kb on + strandat 1683.310 kb on + strandat 1683.311 kb on - strandat 1683.311 kb on - strandat 1683.387 kb on + strandat 1683.393 kb on - strandat 1683.400 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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1,681,119 - -0.1
1,682,986 - -0.7
1,683,073 + -0.6
1,683,074 - -1.4
1,683,115 + -2.0
1,683,115 + -0.8
1,683,116 - +0.8
1,683,305 + +0.1
1,683,306 - -0.3
1,683,310 + +1.1
1,683,310 + +1.2
1,683,311 - +0.4
1,683,311 - +0.4
1,683,387 + +0.9
1,683,393 - -2.3
1,683,400 + -1.8

Or see this region's nucleotide sequence