Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1175 and Echvi_1176 are separated by 128 nucleotides Echvi_1176 and Echvi_1177 are separated by 73 nucleotides Echvi_1177 and Echvi_1178 are separated by 70 nucleotides
Echvi_1175: Echvi_1175 - Chloride channel protein EriC, at 1,351,981 to 1,353,756
_1175
Echvi_1176: Echvi_1176 - MazG family protein, at 1,353,885 to 1,354,685
_1176
Echvi_1177: Echvi_1177 - hypothetical protein, at 1,354,759 to 1,354,989
_1177
Echvi_1178: Echvi_1178 - phosphoglucosamine mutase, at 1,355,060 to 1,356,451
_1178
Position (kb)
1353
1354
1355 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1352.895 kb on - strand, within Echvi_1175 at 1352.941 kb on + strand, within Echvi_1175 at 1352.942 kb on - strand, within Echvi_1175 at 1353.008 kb on - strand, within Echvi_1175 at 1353.015 kb on - strand, within Echvi_1175 at 1353.053 kb on + strand, within Echvi_1175 at 1353.053 kb on + strand, within Echvi_1175 at 1353.053 kb on + strand, within Echvi_1175 at 1353.053 kb on + strand, within Echvi_1175 at 1353.053 kb on + strand, within Echvi_1175 at 1353.054 kb on - strand, within Echvi_1175 at 1353.054 kb on - strand, within Echvi_1175 at 1353.054 kb on - strand, within Echvi_1175 at 1353.056 kb on + strand, within Echvi_1175 at 1353.124 kb on + strand, within Echvi_1175 at 1353.124 kb on + strand, within Echvi_1175 at 1353.125 kb on - strand, within Echvi_1175 at 1353.125 kb on - strand, within Echvi_1175 at 1353.125 kb on - strand, within Echvi_1175 at 1353.188 kb on - strand, within Echvi_1175 at 1353.196 kb on + strand, within Echvi_1175 at 1353.196 kb on + strand, within Echvi_1175 at 1353.196 kb on + strand, within Echvi_1175 at 1353.197 kb on - strand, within Echvi_1175 at 1353.202 kb on - strand, within Echvi_1175 at 1353.286 kb on - strand, within Echvi_1175 at 1353.409 kb on - strand, within Echvi_1175 at 1353.423 kb on - strand, within Echvi_1175 at 1353.423 kb on - strand, within Echvi_1175 at 1353.423 kb on - strand, within Echvi_1175 at 1353.423 kb on - strand, within Echvi_1175 at 1353.465 kb on + strand, within Echvi_1175 at 1353.467 kb on + strand, within Echvi_1175 at 1353.498 kb on - strand, within Echvi_1175 at 1353.498 kb on - strand, within Echvi_1175 at 1353.498 kb on - strand, within Echvi_1175 at 1353.512 kb on + strand, within Echvi_1175 at 1353.513 kb on - strand, within Echvi_1175 at 1353.513 kb on - strand, within Echvi_1175 at 1353.513 kb on - strand, within Echvi_1175 at 1353.513 kb on - strand, within Echvi_1175 at 1353.513 kb on - strand, within Echvi_1175 at 1353.527 kb on + strand, within Echvi_1175 at 1353.527 kb on + strand, within Echvi_1175 at 1353.527 kb on + strand, within Echvi_1175 at 1353.527 kb on + strand, within Echvi_1175 at 1353.528 kb on - strand, within Echvi_1175 at 1353.528 kb on - strand, within Echvi_1175 at 1353.528 kb on - strand, within Echvi_1175 at 1353.547 kb on + strand, within Echvi_1175 at 1353.561 kb on + strand, within Echvi_1175 at 1353.615 kb on + strand at 1353.637 kb on + strand at 1353.638 kb on - strand at 1353.679 kb on - strand at 1353.685 kb on + strand at 1353.686 kb on - strand at 1353.686 kb on - strand at 1353.699 kb on + strand at 1353.706 kb on + strand at 1353.706 kb on + strand at 1353.706 kb on + strand at 1353.706 kb on + strand at 1353.706 kb on + strand at 1353.706 kb on + strand at 1353.707 kb on - strand at 1353.707 kb on - strand at 1353.707 kb on - strand at 1353.707 kb on - strand at 1353.708 kb on + strand at 1353.708 kb on + strand at 1353.708 kb on + strand at 1353.709 kb on - strand at 1353.709 kb on - strand at 1353.714 kb on + strand at 1353.715 kb on - strand at 1353.739 kb on + strand at 1353.798 kb on - strand at 1353.802 kb on + strand at 1353.803 kb on - strand at 1353.865 kb on - strand at 1353.871 kb on - strand at 1353.873 kb on - strand at 1353.979 kb on + strand, within Echvi_1176 at 1353.979 kb on + strand, within Echvi_1176 at 1353.991 kb on + strand, within Echvi_1176 at 1353.991 kb on + strand, within Echvi_1176 at 1353.992 kb on - strand, within Echvi_1176 at 1354.035 kb on - strand, within Echvi_1176 at 1354.035 kb on - strand, within Echvi_1176 at 1354.035 kb on - strand, within Echvi_1176 at 1354.037 kb on + strand, within Echvi_1176 at 1354.054 kb on + strand, within Echvi_1176 at 1354.071 kb on + strand, within Echvi_1176 at 1354.071 kb on + strand, within Echvi_1176 at 1354.072 kb on - strand, within Echvi_1176 at 1354.072 kb on - strand, within Echvi_1176 at 1354.110 kb on + strand, within Echvi_1176 at 1354.110 kb on + strand, within Echvi_1176 at 1354.110 kb on + strand, within Echvi_1176 at 1354.110 kb on + strand, within Echvi_1176 at 1354.110 kb on + strand, within Echvi_1176 at 1354.110 kb on + strand, within Echvi_1176 at 1354.111 kb on - strand, within Echvi_1176 at 1354.111 kb on - strand, within Echvi_1176 at 1354.111 kb on - strand, within Echvi_1176 at 1354.113 kb on - strand, within Echvi_1176 at 1354.113 kb on - strand, within Echvi_1176 at 1354.367 kb on - strand, within Echvi_1176 at 1354.371 kb on - strand, within Echvi_1176 at 1354.402 kb on - strand, within Echvi_1176 at 1354.402 kb on - strand, within Echvi_1176 at 1354.402 kb on - strand, within Echvi_1176 at 1354.467 kb on + strand, within Echvi_1176 at 1354.554 kb on + strand, within Echvi_1176 at 1354.554 kb on + strand, within Echvi_1176 at 1354.554 kb on + strand, within Echvi_1176 at 1354.555 kb on - strand, within Echvi_1176 at 1354.555 kb on - strand, within Echvi_1176 at 1354.555 kb on - strand, within Echvi_1176 at 1354.555 kb on - strand, within Echvi_1176 at 1354.555 kb on - strand, within Echvi_1176 at 1354.614 kb on + strand at 1354.615 kb on - strand at 1354.615 kb on - strand at 1354.615 kb on - strand at 1354.653 kb on + strand at 1354.653 kb on + strand at 1354.685 kb on + strand at 1354.686 kb on - strand at 1354.686 kb on - strand at 1354.686 kb on - strand at 1354.701 kb on - strand at 1354.728 kb on + strand at 1354.729 kb on - strand at 1354.987 kb on + strand at 1354.987 kb on + strand at 1355.035 kb on + strand at 1355.035 kb on + strand at 1355.035 kb on + strand at 1355.035 kb on + strand at 1355.035 kb on + strand at 1355.046 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 1,352,895 - Echvi_1175 0.51 -0.4 1,352,941 + Echvi_1175 0.54 -2.7 1,352,942 - Echvi_1175 0.54 -2.4 1,353,008 - Echvi_1175 0.58 -2.8 1,353,015 - Echvi_1175 0.58 +0.4 1,353,053 + Echvi_1175 0.60 -1.6 1,353,053 + Echvi_1175 0.60 -2.0 1,353,053 + Echvi_1175 0.60 -1.5 1,353,053 + Echvi_1175 0.60 -1.9 1,353,053 + Echvi_1175 0.60 -0.1 1,353,054 - Echvi_1175 0.60 -0.5 1,353,054 - Echvi_1175 0.60 -1.8 1,353,054 - Echvi_1175 0.60 -2.2 1,353,056 + Echvi_1175 0.61 +0.4 1,353,124 + Echvi_1175 0.64 -0.4 1,353,124 + Echvi_1175 0.64 -2.2 1,353,125 - Echvi_1175 0.64 -4.0 1,353,125 - Echvi_1175 0.64 -2.7 1,353,125 - Echvi_1175 0.64 -1.6 1,353,188 - Echvi_1175 0.68 +0.4 1,353,196 + Echvi_1175 0.68 +0.7 1,353,196 + Echvi_1175 0.68 -0.6 1,353,196 + Echvi_1175 0.68 -1.4 1,353,197 - Echvi_1175 0.68 -3.2 1,353,202 - Echvi_1175 0.69 -0.4 1,353,286 - Echvi_1175 0.73 -2.8 1,353,409 - Echvi_1175 0.80 -3.3 1,353,423 - Echvi_1175 0.81 -2.8 1,353,423 - Echvi_1175 0.81 -1.2 1,353,423 - Echvi_1175 0.81 -1.5 1,353,423 - Echvi_1175 0.81 -2.2 1,353,465 + Echvi_1175 0.84 -1.2 1,353,467 + Echvi_1175 0.84 -3.7 1,353,498 - Echvi_1175 0.85 -3.0 1,353,498 - Echvi_1175 0.85 -0.1 1,353,498 - Echvi_1175 0.85 -3.9 1,353,512 + Echvi_1175 0.86 -2.2 1,353,513 - Echvi_1175 0.86 -1.9 1,353,513 - Echvi_1175 0.86 -1.1 1,353,513 - Echvi_1175 0.86 -2.2 1,353,513 - Echvi_1175 0.86 -0.4 1,353,513 - Echvi_1175 0.86 -0.4 1,353,527 + Echvi_1175 0.87 -2.4 1,353,527 + Echvi_1175 0.87 -2.0 1,353,527 + Echvi_1175 0.87 -0.4 1,353,527 + Echvi_1175 0.87 -2.4 1,353,528 - Echvi_1175 0.87 -1.9 1,353,528 - Echvi_1175 0.87 -0.7 1,353,528 - Echvi_1175 0.87 -1.5 1,353,547 + Echvi_1175 0.88 -1.8 1,353,561 + Echvi_1175 0.89 -0.7 1,353,615 + -1.2 1,353,637 + +0.9 1,353,638 - -1.9 1,353,679 - -0.8 1,353,685 + -2.3 1,353,686 - -3.2 1,353,686 - -1.6 1,353,699 + -2.5 1,353,706 + -3.4 1,353,706 + -1.6 1,353,706 + -3.3 1,353,706 + -3.6 1,353,706 + -2.2 1,353,706 + +0.6 1,353,707 - -3.2 1,353,707 - -3.6 1,353,707 - -0.6 1,353,707 - -1.5 1,353,708 + -2.2 1,353,708 + -0.6 1,353,708 + +0.9 1,353,709 - -1.4 1,353,709 - -3.0 1,353,714 + -1.2 1,353,715 - -1.6 1,353,739 + -1.9 1,353,798 - -0.6 1,353,802 + -2.4 1,353,803 - +0.4 1,353,865 - +0.6 1,353,871 - +1.0 1,353,873 - +0.5 1,353,979 + Echvi_1176 0.12 +0.2 1,353,979 + Echvi_1176 0.12 +0.3 1,353,991 + Echvi_1176 0.13 +0.0 1,353,991 + Echvi_1176 0.13 +1.1 1,353,992 - Echvi_1176 0.13 +0.6 1,354,035 - Echvi_1176 0.19 -0.3 1,354,035 - Echvi_1176 0.19 +0.9 1,354,035 - Echvi_1176 0.19 +0.5 1,354,037 + Echvi_1176 0.19 +1.0 1,354,054 + Echvi_1176 0.21 +1.7 1,354,071 + Echvi_1176 0.23 -0.6 1,354,071 + Echvi_1176 0.23 -1.6 1,354,072 - Echvi_1176 0.23 +0.5 1,354,072 - Echvi_1176 0.23 +0.8 1,354,110 + Echvi_1176 0.28 -0.1 1,354,110 + Echvi_1176 0.28 +1.9 1,354,110 + Echvi_1176 0.28 +0.6 1,354,110 + Echvi_1176 0.28 -0.0 1,354,110 + Echvi_1176 0.28 +0.6 1,354,110 + Echvi_1176 0.28 +1.8 1,354,111 - Echvi_1176 0.28 -3.2 1,354,111 - Echvi_1176 0.28 +0.4 1,354,111 - Echvi_1176 0.28 +0.7 1,354,113 - Echvi_1176 0.28 -1.5 1,354,113 - Echvi_1176 0.28 +0.5 1,354,367 - Echvi_1176 0.60 +1.9 1,354,371 - Echvi_1176 0.61 +0.0 1,354,402 - Echvi_1176 0.65 +1.9 1,354,402 - Echvi_1176 0.65 +1.0 1,354,402 - Echvi_1176 0.65 -0.1 1,354,467 + Echvi_1176 0.73 +0.2 1,354,554 + Echvi_1176 0.84 +1.0 1,354,554 + Echvi_1176 0.84 -0.5 1,354,554 + Echvi_1176 0.84 +0.1 1,354,555 - Echvi_1176 0.84 +1.5 1,354,555 - Echvi_1176 0.84 -0.0 1,354,555 - Echvi_1176 0.84 +0.3 1,354,555 - Echvi_1176 0.84 -0.4 1,354,555 - Echvi_1176 0.84 +1.4 1,354,614 + +0.2 1,354,615 - -1.9 1,354,615 - +0.8 1,354,615 - +1.2 1,354,653 + +0.0 1,354,653 + -0.6 1,354,685 + -1.2 1,354,686 - +1.0 1,354,686 - -0.1 1,354,686 - +0.6 1,354,701 - -1.9 1,354,728 + -1.4 1,354,729 - -0.4 1,354,987 + -0.6 1,354,987 + -0.1 1,355,035 + +0.4 1,355,035 + +0.2 1,355,035 + -1.1 1,355,035 + +0.2 1,355,035 + -1.4 1,355,046 + -2.3
Or see this region's nucleotide sequence