Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0973 and Echvi_0974 are separated by 198 nucleotides Echvi_0974 and Echvi_0975 are separated by 139 nucleotides Echvi_0975 and Echvi_0976 are separated by 108 nucleotides
Echvi_0973: Echvi_0973 - hypothetical protein, at 1,125,369 to 1,125,782
_0973
Echvi_0974: Echvi_0974 - Predicted O-methyltransferase, at 1,125,981 to 1,126,577
_0974
Echvi_0975: Echvi_0975 - putative efflux protein, MATE family, at 1,126,717 to 1,128,087
_0975
Echvi_0976: Echvi_0976 - phospholipase C, phosphocholine-specific, Pseudomonas-type, at 1,128,196 to 1,130,721
_0976
Position (kb)
1126
1127
1128
1129 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1125.742 kb on + strand at 1125.743 kb on - strand at 1125.780 kb on + strand at 1125.780 kb on + strand at 1125.819 kb on - strand at 1125.826 kb on - strand at 1125.835 kb on + strand at 1125.853 kb on + strand at 1125.853 kb on + strand at 1125.853 kb on + strand at 1125.854 kb on - strand at 1125.854 kb on - strand at 1125.854 kb on - strand at 1125.882 kb on + strand at 1125.882 kb on + strand at 1125.882 kb on + strand at 1125.883 kb on - strand at 1125.930 kb on + strand at 1125.949 kb on - strand at 1126.031 kb on + strand at 1126.036 kb on - strand at 1126.117 kb on - strand, within Echvi_0974 at 1126.139 kb on - strand, within Echvi_0974 at 1126.155 kb on + strand, within Echvi_0974 at 1126.156 kb on - strand, within Echvi_0974 at 1126.156 kb on - strand, within Echvi_0974 at 1126.156 kb on - strand, within Echvi_0974 at 1126.176 kb on + strand, within Echvi_0974 at 1126.176 kb on + strand, within Echvi_0974 at 1126.186 kb on + strand, within Echvi_0974 at 1126.186 kb on + strand, within Echvi_0974 at 1126.411 kb on - strand, within Echvi_0974 at 1126.590 kb on - strand at 1126.592 kb on - strand at 1126.596 kb on - strand at 1126.668 kb on - strand at 1126.679 kb on - strand at 1126.685 kb on - strand at 1126.685 kb on - strand at 1126.692 kb on + strand at 1126.692 kb on + strand at 1126.692 kb on + strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.693 kb on - strand at 1126.697 kb on - strand at 1126.741 kb on + strand at 1127.056 kb on + strand, within Echvi_0975 at 1127.107 kb on + strand, within Echvi_0975 at 1127.107 kb on + strand, within Echvi_0975 at 1127.126 kb on - strand, within Echvi_0975 at 1127.144 kb on + strand, within Echvi_0975 at 1127.144 kb on + strand, within Echvi_0975 at 1127.145 kb on - strand, within Echvi_0975 at 1127.175 kb on - strand, within Echvi_0975 at 1127.221 kb on + strand, within Echvi_0975 at 1127.221 kb on + strand, within Echvi_0975 at 1127.221 kb on + strand, within Echvi_0975 at 1127.221 kb on + strand, within Echvi_0975 at 1127.221 kb on + strand, within Echvi_0975 at 1127.225 kb on + strand, within Echvi_0975 at 1127.225 kb on + strand, within Echvi_0975 at 1127.225 kb on + strand, within Echvi_0975 at 1127.225 kb on + strand, within Echvi_0975 at 1127.226 kb on - strand, within Echvi_0975 at 1127.226 kb on - strand, within Echvi_0975 at 1127.226 kb on - strand, within Echvi_0975 at 1127.226 kb on - strand, within Echvi_0975 at 1127.365 kb on + strand, within Echvi_0975 at 1127.365 kb on + strand, within Echvi_0975 at 1127.552 kb on - strand, within Echvi_0975 at 1127.589 kb on - strand, within Echvi_0975 at 1127.806 kb on - strand, within Echvi_0975 at 1127.843 kb on + strand, within Echvi_0975 at 1127.863 kb on - strand, within Echvi_0975 at 1127.902 kb on - strand, within Echvi_0975 at 1127.902 kb on - strand, within Echvi_0975 at 1127.912 kb on + strand, within Echvi_0975 at 1127.940 kb on - strand, within Echvi_0975 at 1127.944 kb on + strand, within Echvi_0975 at 1127.945 kb on - strand, within Echvi_0975 at 1127.945 kb on - strand, within Echvi_0975 at 1127.945 kb on - strand, within Echvi_0975 at 1127.948 kb on - strand, within Echvi_0975 at 1127.956 kb on + strand at 1127.956 kb on + strand at 1127.956 kb on + strand at 1127.957 kb on - strand at 1127.957 kb on - strand at 1127.957 kb on - strand at 1127.962 kb on - strand at 1127.978 kb on + strand at 1127.978 kb on + strand at 1127.979 kb on - strand at 1127.987 kb on - strand at 1128.026 kb on + strand at 1128.027 kb on - strand at 1128.037 kb on + strand at 1128.038 kb on - strand at 1128.101 kb on + strand at 1128.101 kb on + strand at 1128.113 kb on + strand at 1128.188 kb on - strand at 1128.188 kb on - strand at 1128.228 kb on + strand at 1128.308 kb on + strand at 1128.365 kb on - strand at 1128.612 kb on + strand, within Echvi_0976 at 1128.612 kb on + strand, within Echvi_0976 at 1128.612 kb on + strand, within Echvi_0976 at 1128.612 kb on + strand, within Echvi_0976 at 1128.613 kb on - strand, within Echvi_0976 at 1128.613 kb on - strand, within Echvi_0976 at 1128.613 kb on - strand, within Echvi_0976 at 1128.613 kb on - strand, within Echvi_0976 at 1128.615 kb on - strand, within Echvi_0976 at 1128.707 kb on + strand, within Echvi_0976 at 1128.708 kb on - strand, within Echvi_0976 at 1128.748 kb on - strand, within Echvi_0976 at 1128.812 kb on + strand, within Echvi_0976 at 1128.813 kb on - strand, within Echvi_0976 at 1128.813 kb on - strand, within Echvi_0976 at 1128.951 kb on + strand, within Echvi_0976 at 1128.959 kb on + strand, within Echvi_0976 at 1128.959 kb on + strand, within Echvi_0976 at 1128.960 kb on - strand, within Echvi_0976 at 1129.023 kb on - strand, within Echvi_0976 at 1129.059 kb on + strand, within Echvi_0976 at 1129.060 kb on - strand, within Echvi_0976
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 1,125,742 + +0.0 1,125,743 - -0.8 1,125,780 + -1.0 1,125,780 + +0.2 1,125,819 - -0.3 1,125,826 - +0.8 1,125,835 + +1.9 1,125,853 + +0.2 1,125,853 + +0.8 1,125,853 + -1.8 1,125,854 - +0.9 1,125,854 - -1.8 1,125,854 - +1.4 1,125,882 + +1.0 1,125,882 + +0.2 1,125,882 + -1.1 1,125,883 - -3.6 1,125,930 + -1.2 1,125,949 - +0.1 1,126,031 + +2.2 1,126,036 - +0.8 1,126,117 - Echvi_0974 0.23 -0.8 1,126,139 - Echvi_0974 0.26 +0.2 1,126,155 + Echvi_0974 0.29 +0.6 1,126,156 - Echvi_0974 0.29 -0.0 1,126,156 - Echvi_0974 0.29 +1.1 1,126,156 - Echvi_0974 0.29 -1.2 1,126,176 + Echvi_0974 0.33 -0.1 1,126,176 + Echvi_0974 0.33 +0.9 1,126,186 + Echvi_0974 0.34 -0.8 1,126,186 + Echvi_0974 0.34 -1.4 1,126,411 - Echvi_0974 0.72 +0.5 1,126,590 - +0.4 1,126,592 - -0.2 1,126,596 - -1.3 1,126,668 - -0.2 1,126,679 - +0.6 1,126,685 - -1.7 1,126,685 - -2.1 1,126,692 + -1.5 1,126,692 + -0.4 1,126,692 + -0.9 1,126,693 - -1.6 1,126,693 - -1.5 1,126,693 - +0.4 1,126,693 - -0.3 1,126,693 - -0.7 1,126,693 - +0.4 1,126,693 - -1.1 1,126,693 - -0.0 1,126,693 - +0.3 1,126,697 - +0.6 1,126,741 + +0.6 1,127,056 + Echvi_0975 0.25 -1.4 1,127,107 + Echvi_0975 0.28 -0.2 1,127,107 + Echvi_0975 0.28 -0.7 1,127,126 - Echvi_0975 0.30 -0.0 1,127,144 + Echvi_0975 0.31 -0.1 1,127,144 + Echvi_0975 0.31 -0.6 1,127,145 - Echvi_0975 0.31 -1.2 1,127,175 - Echvi_0975 0.33 -1.0 1,127,221 + Echvi_0975 0.37 -0.4 1,127,221 + Echvi_0975 0.37 -0.7 1,127,221 + Echvi_0975 0.37 -0.2 1,127,221 + Echvi_0975 0.37 -2.2 1,127,221 + Echvi_0975 0.37 -0.0 1,127,225 + Echvi_0975 0.37 -0.4 1,127,225 + Echvi_0975 0.37 -1.5 1,127,225 + Echvi_0975 0.37 -1.3 1,127,225 + Echvi_0975 0.37 +1.1 1,127,226 - Echvi_0975 0.37 -2.6 1,127,226 - Echvi_0975 0.37 -0.6 1,127,226 - Echvi_0975 0.37 +0.9 1,127,226 - Echvi_0975 0.37 -1.5 1,127,365 + Echvi_0975 0.47 -1.0 1,127,365 + Echvi_0975 0.47 -0.8 1,127,552 - Echvi_0975 0.61 +0.4 1,127,589 - Echvi_0975 0.64 +1.4 1,127,806 - Echvi_0975 0.79 +0.2 1,127,843 + Echvi_0975 0.82 +0.7 1,127,863 - Echvi_0975 0.84 -0.9 1,127,902 - Echvi_0975 0.86 -0.5 1,127,902 - Echvi_0975 0.86 +1.3 1,127,912 + Echvi_0975 0.87 -2.2 1,127,940 - Echvi_0975 0.89 +0.5 1,127,944 + Echvi_0975 0.89 -1.4 1,127,945 - Echvi_0975 0.90 +1.0 1,127,945 - Echvi_0975 0.90 -1.0 1,127,945 - Echvi_0975 0.90 -0.2 1,127,948 - Echvi_0975 0.90 +0.2 1,127,956 + -0.8 1,127,956 + +0.4 1,127,956 + -1.6 1,127,957 - -0.1 1,127,957 - +1.0 1,127,957 - +0.4 1,127,962 - -1.2 1,127,978 + -1.2 1,127,978 + +0.2 1,127,979 - +0.8 1,127,987 - -0.4 1,128,026 + +0.3 1,128,027 - +1.2 1,128,037 + -0.6 1,128,038 - +0.4 1,128,101 + -1.8 1,128,101 + -2.0 1,128,113 + -0.8 1,128,188 - -0.2 1,128,188 - +0.1 1,128,228 + -0.2 1,128,308 + +1.2 1,128,365 - +1.0 1,128,612 + Echvi_0976 0.16 -0.3 1,128,612 + Echvi_0976 0.16 +0.3 1,128,612 + Echvi_0976 0.16 -0.5 1,128,612 + Echvi_0976 0.16 +0.0 1,128,613 - Echvi_0976 0.17 -0.1 1,128,613 - Echvi_0976 0.17 +0.4 1,128,613 - Echvi_0976 0.17 -0.7 1,128,613 - Echvi_0976 0.17 +0.7 1,128,615 - Echvi_0976 0.17 -1.2 1,128,707 + Echvi_0976 0.20 -0.3 1,128,708 - Echvi_0976 0.20 -0.2 1,128,748 - Echvi_0976 0.22 +0.1 1,128,812 + Echvi_0976 0.24 -0.3 1,128,813 - Echvi_0976 0.24 +1.8 1,128,813 - Echvi_0976 0.24 +0.7 1,128,951 + Echvi_0976 0.30 +0.8 1,128,959 + Echvi_0976 0.30 -0.0 1,128,959 + Echvi_0976 0.30 +1.9 1,128,960 - Echvi_0976 0.30 +1.6 1,129,023 - Echvi_0976 0.33 -1.6 1,129,059 + Echvi_0976 0.34 +0.1 1,129,060 - Echvi_0976 0.34 -1.9
Or see this region's nucleotide sequence