Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0862 and Echvi_0863 are separated by 184 nucleotides
Echvi_0862: Echvi_0862 - Glutamate dehydrogenase/leucine dehydrogenase, at 982,637 to 983,863
_0862
Echvi_0863: Echvi_0863 - Na+/H+ antiporter NhaD and related arsenite permeases, at 984,048 to 985,574
_0863
Position (kb)
984
985
986 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.053 kb on - strand, within Echvi_0862 at 983.128 kb on - strand, within Echvi_0862 at 983.144 kb on + strand, within Echvi_0862 at 983.145 kb on - strand, within Echvi_0862 at 983.145 kb on - strand, within Echvi_0862 at 983.169 kb on - strand, within Echvi_0862 at 983.170 kb on + strand, within Echvi_0862 at 983.170 kb on + strand, within Echvi_0862 at 983.182 kb on + strand, within Echvi_0862 at 983.214 kb on + strand, within Echvi_0862 at 983.215 kb on - strand, within Echvi_0862 at 983.225 kb on + strand, within Echvi_0862 at 983.226 kb on - strand, within Echvi_0862 at 983.226 kb on - strand, within Echvi_0862 at 983.247 kb on + strand, within Echvi_0862 at 983.286 kb on + strand, within Echvi_0862 at 983.286 kb on + strand, within Echvi_0862 at 983.286 kb on + strand, within Echvi_0862 at 983.361 kb on + strand, within Echvi_0862 at 983.361 kb on + strand, within Echvi_0862 at 983.361 kb on + strand, within Echvi_0862 at 983.362 kb on - strand, within Echvi_0862 at 983.385 kb on + strand, within Echvi_0862 at 983.385 kb on + strand, within Echvi_0862 at 983.385 kb on + strand, within Echvi_0862 at 983.386 kb on - strand, within Echvi_0862 at 983.386 kb on - strand, within Echvi_0862 at 983.446 kb on - strand, within Echvi_0862 at 983.485 kb on - strand, within Echvi_0862 at 983.497 kb on - strand, within Echvi_0862 at 983.593 kb on - strand, within Echvi_0862 at 983.730 kb on + strand, within Echvi_0862 at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.799 kb on + strand at 983.800 kb on - strand at 983.800 kb on - strand at 983.800 kb on - strand at 983.800 kb on - strand at 983.800 kb on - strand at 983.800 kb on - strand at 983.800 kb on - strand at 983.859 kb on + strand at 983.859 kb on + strand at 983.861 kb on + strand at 983.861 kb on + strand at 983.862 kb on - strand at 983.862 kb on - strand at 983.862 kb on - strand at 983.875 kb on + strand at 983.876 kb on - strand at 983.922 kb on + strand at 983.958 kb on + strand at 983.963 kb on + strand at 983.973 kb on + strand at 983.973 kb on + strand at 983.985 kb on + strand at 984.020 kb on + strand at 984.030 kb on + strand at 984.030 kb on + strand at 985.719 kb on + strand at 985.789 kb on + strand at 985.805 kb on + strand at 985.856 kb on - strand at 985.864 kb on + strand at 985.864 kb on + strand at 985.864 kb on + strand at 985.865 kb on - strand at 985.906 kb on - strand at 985.908 kb on + strand at 985.908 kb on + strand at 985.910 kb on + strand at 985.911 kb on - strand at 985.914 kb on + strand at 985.914 kb on + strand at 985.914 kb on + strand at 985.914 kb on + strand at 985.924 kb on + strand at 985.932 kb on + strand at 985.974 kb on + strand at 985.981 kb on + strand at 985.981 kb on + strand at 986.093 kb on - strand at 986.217 kb on - strand at 986.217 kb on - strand at 986.285 kb on + strand at 986.334 kb on + strand at 986.367 kb on + strand at 986.367 kb on + strand at 986.444 kb on + strand at 986.445 kb on - strand at 986.445 kb on - strand at 986.487 kb on - strand at 986.487 kb on - strand at 986.487 kb on - strand at 986.492 kb on - strand at 986.500 kb on + strand at 986.546 kb on + strand at 986.546 kb on + strand at 986.546 kb on + strand at 986.549 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.553 kb on + strand at 986.553 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 983,052 + Echvi_0862 0.34 -4.8 983,052 + Echvi_0862 0.34 -4.0 983,052 + Echvi_0862 0.34 -2.2 983,052 + Echvi_0862 0.34 -5.0 983,052 + Echvi_0862 0.34 -1.0 983,053 - Echvi_0862 0.34 -0.8 983,128 - Echvi_0862 0.40 +0.1 983,144 + Echvi_0862 0.41 -2.9 983,145 - Echvi_0862 0.41 +0.6 983,145 - Echvi_0862 0.41 +0.4 983,169 - Echvi_0862 0.43 -1.2 983,170 + Echvi_0862 0.43 -2.9 983,170 + Echvi_0862 0.43 -2.4 983,182 + Echvi_0862 0.44 -0.8 983,214 + Echvi_0862 0.47 -2.3 983,215 - Echvi_0862 0.47 +0.6 983,225 + Echvi_0862 0.48 -2.8 983,226 - Echvi_0862 0.48 -2.3 983,226 - Echvi_0862 0.48 +0.7 983,247 + Echvi_0862 0.50 -4.7 983,286 + Echvi_0862 0.53 -1.0 983,286 + Echvi_0862 0.53 -3.1 983,286 + Echvi_0862 0.53 -3.4 983,361 + Echvi_0862 0.59 -2.1 983,361 + Echvi_0862 0.59 -3.1 983,361 + Echvi_0862 0.59 -3.4 983,362 - Echvi_0862 0.59 +0.7 983,385 + Echvi_0862 0.61 -2.4 983,385 + Echvi_0862 0.61 -2.4 983,385 + Echvi_0862 0.61 -4.2 983,386 - Echvi_0862 0.61 -0.7 983,386 - Echvi_0862 0.61 +0.5 983,446 - Echvi_0862 0.66 +0.6 983,485 - Echvi_0862 0.69 +1.7 983,497 - Echvi_0862 0.70 +1.7 983,593 - Echvi_0862 0.78 -0.0 983,730 + Echvi_0862 0.89 -1.8 983,799 + -3.8 983,799 + -3.7 983,799 + -3.2 983,799 + -2.3 983,799 + -2.9 983,799 + -4.5 983,799 + -2.5 983,799 + -2.4 983,799 + -4.4 983,799 + -2.3 983,799 + -2.5 983,800 - -0.7 983,800 - +0.7 983,800 - -1.1 983,800 - -2.2 983,800 - -0.3 983,800 - -0.7 983,800 - -0.3 983,859 + -2.6 983,859 + -3.5 983,861 + -3.5 983,861 + -1.0 983,862 - -2.1 983,862 - +2.0 983,862 - +1.7 983,875 + -3.4 983,876 - -2.7 983,922 + -2.4 983,958 + -4.3 983,963 + -2.6 983,973 + -3.8 983,973 + -2.5 983,985 + -2.0 984,020 + -4.3 984,030 + -4.6 984,030 + -4.2 985,719 + +1.0 985,789 + +0.5 985,805 + -2.9 985,856 - +0.1 985,864 + -0.3 985,864 + -2.9 985,864 + -0.2 985,865 - -0.0 985,906 - -1.7 985,908 + -0.4 985,908 + +0.4 985,910 + +0.9 985,911 - +1.9 985,914 + +1.6 985,914 + +0.1 985,914 + -2.5 985,914 + +0.5 985,924 + -3.1 985,932 + +0.7 985,974 + +0.9 985,981 + +1.7 985,981 + -2.5 986,093 - +2.0 986,217 - -0.1 986,217 - -1.6 986,285 + -0.3 986,334 + -0.1 986,367 + -2.0 986,367 + +0.9 986,444 + -0.8 986,445 - +0.4 986,445 - -0.8 986,487 - -0.4 986,487 - -1.0 986,487 - -2.5 986,492 - -0.0 986,500 + +1.6 986,546 + +1.9 986,546 + +0.9 986,546 + -0.9 986,549 + +0.8 986,551 + -0.7 986,551 + +2.0 986,551 + +1.3 986,551 + -0.5 986,551 + +1.1 986,553 + +0.0 986,553 + -0.9
Or see this region's nucleotide sequence