Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0814 and Echvi_0815 are separated by 20 nucleotides Echvi_0815 and Echvi_0816 are separated by 139 nucleotides Echvi_0816 and Echvi_0817 overlap by 3 nucleotides Echvi_0817 and Echvi_0818 are separated by 204 nucleotides
Echvi_0814: Echvi_0814 - ribosome-associated GTPase EngA, at 932,724 to 934,037
_0814
Echvi_0815: Echvi_0815 - GTP-binding protein Era, at 934,058 to 934,948
_0815
Echvi_0816: Echvi_0816 - tRNA, at 935,088 to 935,163
_0816
Echvi_0817: Echvi_0817 - hypothetical protein, at 935,161 to 935,358
_0817
Echvi_0818: Echvi_0818 - Uncharacterized conserved protein, at 935,563 to 936,705
_0818
Position (kb) 934
935 Strain fitness (log2 ratio) -2
-1
0
1
2 at 934.060 kb on - strand at 935.320 kb on + strand, within Echvi_0817 at 935.320 kb on + strand, within Echvi_0817 at 935.392 kb on - strand at 935.392 kb on - strand at 935.433 kb on + strand at 935.438 kb on - strand at 935.443 kb on + strand at 935.616 kb on + strand at 935.637 kb on - strand at 935.662 kb on - strand at 935.668 kb on - strand at 935.714 kb on + strand, within Echvi_0818 at 935.721 kb on + strand, within Echvi_0818 at 935.721 kb on + strand, within Echvi_0818 at 935.721 kb on + strand, within Echvi_0818 at 935.722 kb on - strand, within Echvi_0818 at 935.722 kb on - strand, within Echvi_0818 at 935.742 kb on - strand, within Echvi_0818 at 935.756 kb on + strand, within Echvi_0818 at 935.756 kb on + strand, within Echvi_0818 at 935.757 kb on - strand, within Echvi_0818 at 935.757 kb on - strand, within Echvi_0818 at 935.757 kb on - strand, within Echvi_0818
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 934,060 - +0.9 935,320 + Echvi_0817 0.80 +0.2 935,320 + Echvi_0817 0.80 +0.3 935,392 - -2.2 935,392 - -2.5 935,433 + +0.2 935,438 - -2.0 935,443 + -0.9 935,616 + +0.2 935,637 - +0.2 935,662 - -0.1 935,668 - +0.4 935,714 + Echvi_0818 0.13 +1.2 935,721 + Echvi_0818 0.14 -2.0 935,721 + Echvi_0818 0.14 -0.2 935,721 + Echvi_0818 0.14 +2.0 935,722 - Echvi_0818 0.14 +0.3 935,722 - Echvi_0818 0.14 -0.2 935,742 - Echvi_0818 0.16 +1.0 935,756 + Echvi_0818 0.17 +0.9 935,756 + Echvi_0818 0.17 +0.7 935,757 - Echvi_0818 0.17 +0.4 935,757 - Echvi_0818 0.17 -0.5 935,757 - Echvi_0818 0.17 -0.7
Or see this region's nucleotide sequence