Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0577 and Echvi_0578 are separated by 304 nucleotides Echvi_0578 and Echvi_0579 are separated by 513 nucleotides
Echvi_0577: Echvi_0577 - Ornithine aminotransferase (EC 2.6.1.13) <small>(from data)</small>, at 653,566 to 654,807
_0577
Echvi_0578: Echvi_0578 - Delta-aminolevulinic acid dehydratase, at 655,112 to 656,080
_0578
Echvi_0579: Echvi_0579 - ammonium transporter, at 656,594 to 657,904
_0579
Position (kb) 655
656
657 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 654.122 kb on + strand, within Echvi_0577 at 654.122 kb on + strand, within Echvi_0577 at 654.122 kb on + strand, within Echvi_0577 at 654.123 kb on - strand, within Echvi_0577 at 654.125 kb on + strand, within Echvi_0577 at 654.126 kb on - strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.186 kb on - strand, within Echvi_0577 at 654.186 kb on - strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.205 kb on + strand, within Echvi_0577 at 654.210 kb on + strand, within Echvi_0577 at 654.218 kb on + strand, within Echvi_0577 at 654.218 kb on + strand, within Echvi_0577 at 654.219 kb on - strand, within Echvi_0577 at 654.245 kb on + strand, within Echvi_0577 at 654.400 kb on - strand, within Echvi_0577 at 654.551 kb on + strand, within Echvi_0577 at 654.699 kb on + strand at 654.699 kb on + strand at 654.700 kb on - strand at 654.711 kb on + strand at 654.712 kb on - strand at 654.712 kb on - strand at 654.712 kb on - strand at 654.712 kb on - strand at 654.806 kb on - strand at 654.896 kb on + strand at 654.907 kb on + strand at 654.908 kb on - strand at 654.908 kb on - strand at 654.954 kb on + strand at 654.985 kb on + strand at 655.034 kb on + strand at 655.034 kb on + strand at 655.034 kb on + strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.036 kb on + strand at 655.036 kb on + strand at 655.036 kb on + strand at 655.036 kb on + strand at 655.037 kb on - strand at 655.037 kb on - strand at 655.037 kb on - strand at 655.037 kb on - strand at 655.107 kb on + strand at 655.107 kb on + strand at 655.107 kb on + strand at 656.100 kb on + strand at 656.570 kb on - strand at 656.593 kb on + strand at 656.609 kb on - strand at 656.617 kb on - strand at 656.629 kb on + strand at 656.682 kb on + strand at 656.690 kb on - strand at 656.692 kb on + strand at 656.692 kb on + strand at 656.728 kb on - strand, within Echvi_0579 at 656.810 kb on - strand, within Echvi_0579 at 656.836 kb on + strand, within Echvi_0579 at 656.837 kb on - strand, within Echvi_0579 at 656.868 kb on - strand, within Echvi_0579 at 656.954 kb on - strand, within Echvi_0579 at 656.984 kb on + strand, within Echvi_0579 at 656.985 kb on - strand, within Echvi_0579 at 656.985 kb on - strand, within Echvi_0579
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 654,122 + Echvi_0577 0.45 -1.1 654,122 + Echvi_0577 0.45 +0.8 654,122 + Echvi_0577 0.45 -0.9 654,123 - Echvi_0577 0.45 -1.1 654,125 + Echvi_0577 0.45 -2.1 654,126 - Echvi_0577 0.45 -1.7 654,185 + Echvi_0577 0.50 -1.7 654,185 + Echvi_0577 0.50 -0.6 654,185 + Echvi_0577 0.50 -0.1 654,185 + Echvi_0577 0.50 -0.8 654,186 - Echvi_0577 0.50 +0.0 654,186 - Echvi_0577 0.50 -2.1 654,187 + Echvi_0577 0.50 -0.9 654,187 + Echvi_0577 0.50 +1.2 654,187 + Echvi_0577 0.50 +0.6 654,187 + Echvi_0577 0.50 -0.4 654,187 + Echvi_0577 0.50 -0.9 654,188 - Echvi_0577 0.50 -0.1 654,188 - Echvi_0577 0.50 +1.6 654,188 - Echvi_0577 0.50 -2.1 654,188 - Echvi_0577 0.50 -1.0 654,188 - Echvi_0577 0.50 -1.2 654,188 - Echvi_0577 0.50 +1.7 654,188 - Echvi_0577 0.50 -0.7 654,188 - Echvi_0577 0.50 -0.8 654,205 + Echvi_0577 0.51 -0.4 654,210 + Echvi_0577 0.52 +0.5 654,218 + Echvi_0577 0.52 -0.6 654,218 + Echvi_0577 0.52 +1.1 654,219 - Echvi_0577 0.53 -1.1 654,245 + Echvi_0577 0.55 -2.2 654,400 - Echvi_0577 0.67 +0.8 654,551 + Echvi_0577 0.79 -0.3 654,699 + -0.6 654,699 + -2.1 654,700 - -0.5 654,711 + -1.9 654,712 - +0.5 654,712 - +0.8 654,712 - -2.0 654,712 - +1.8 654,806 - +0.3 654,896 + +0.1 654,907 + -0.0 654,908 - -0.3 654,908 - -1.2 654,954 + -0.3 654,985 + -0.5 655,034 + +1.1 655,034 + +2.0 655,034 + -0.4 655,035 - -2.9 655,035 - +1.0 655,035 - -0.2 655,035 - -0.6 655,035 - +1.5 655,036 + -1.6 655,036 + +2.0 655,036 + +0.1 655,036 + +0.0 655,037 - -1.0 655,037 - -1.3 655,037 - -0.5 655,037 - -1.3 655,107 + +1.2 655,107 + +1.2 655,107 + +0.1 656,100 + +0.4 656,570 - +2.4 656,593 + +2.2 656,609 - +2.6 656,617 - +1.1 656,629 + +1.6 656,682 + +0.7 656,690 - +1.2 656,692 + +1.8 656,692 + +1.6 656,728 - Echvi_0579 0.10 +1.0 656,810 - Echvi_0579 0.16 +1.1 656,836 + Echvi_0579 0.18 -0.6 656,837 - Echvi_0579 0.19 +2.0 656,868 - Echvi_0579 0.21 +1.5 656,954 - Echvi_0579 0.27 +1.6 656,984 + Echvi_0579 0.30 +1.2 656,985 - Echvi_0579 0.30 -0.3 656,985 - Echvi_0579 0.30 +0.7
Or see this region's nucleotide sequence