Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0524 and Echvi_0525 are separated by 166 nucleotides Echvi_0525 and Echvi_0526 are separated by 153 nucleotides Echvi_0526 and Echvi_0527 are separated by 93 nucleotides Echvi_0527 and Echvi_0528 are separated by 46 nucleotides Echvi_0528 and Echvi_0529 are separated by 8 nucleotides
Echvi_0524: Echvi_0524 - hypothetical protein, at 592,336 to 594,291
_0524
Echvi_0525: Echvi_0525 - hypothetical protein, at 594,458 to 595,132
_0525
Echvi_0526: Echvi_0526 - hypothetical protein, at 595,286 to 595,378
_0526
Echvi_0527: Echvi_0527 - Predicted endonuclease containing a URI domain, at 595,472 to 595,720
_0527
Echvi_0528: Echvi_0528 - tRNA, at 595,767 to 595,843
_0528
Echvi_0529: Echvi_0529 - Predicted endonuclease containing a URI domain, at 595,852 to 596,106
_0529
Position (kb) 594
595
596 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 593.557 kb on - strand, within Echvi_0524 at 593.627 kb on + strand, within Echvi_0524 at 593.627 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.696 kb on + strand, within Echvi_0524 at 593.697 kb on - strand, within Echvi_0524 at 593.720 kb on - strand, within Echvi_0524 at 593.778 kb on + strand, within Echvi_0524 at 593.850 kb on - strand, within Echvi_0524 at 593.890 kb on + strand, within Echvi_0524 at 593.890 kb on + strand, within Echvi_0524 at 593.890 kb on + strand, within Echvi_0524 at 593.891 kb on - strand, within Echvi_0524 at 593.891 kb on - strand, within Echvi_0524 at 594.007 kb on + strand, within Echvi_0524 at 594.007 kb on + strand, within Echvi_0524 at 594.069 kb on + strand, within Echvi_0524 at 594.104 kb on + strand at 594.104 kb on + strand at 594.126 kb on - strand at 594.158 kb on + strand at 594.159 kb on - strand at 594.180 kb on + strand at 594.180 kb on + strand at 594.232 kb on - strand at 594.254 kb on - strand at 594.254 kb on - strand at 594.254 kb on - strand at 594.283 kb on - strand at 594.285 kb on - strand at 594.292 kb on - strand at 594.305 kb on + strand at 594.325 kb on - strand at 594.351 kb on + strand at 594.367 kb on + strand at 594.398 kb on + strand at 594.460 kb on - strand at 594.465 kb on - strand at 594.471 kb on + strand at 594.471 kb on + strand at 594.589 kb on + strand, within Echvi_0525 at 594.589 kb on + strand, within Echvi_0525 at 594.592 kb on + strand, within Echvi_0525 at 594.593 kb on - strand, within Echvi_0525 at 594.593 kb on - strand, within Echvi_0525 at 594.593 kb on - strand, within Echvi_0525 at 594.607 kb on + strand, within Echvi_0525 at 594.609 kb on + strand, within Echvi_0525 at 594.609 kb on + strand, within Echvi_0525 at 594.610 kb on - strand, within Echvi_0525 at 594.612 kb on + strand, within Echvi_0525 at 594.612 kb on + strand, within Echvi_0525 at 594.612 kb on + strand, within Echvi_0525 at 594.613 kb on - strand, within Echvi_0525 at 594.614 kb on + strand, within Echvi_0525 at 594.614 kb on + strand, within Echvi_0525 at 594.614 kb on + strand, within Echvi_0525 at 594.614 kb on + strand, within Echvi_0525 at 594.614 kb on + strand, within Echvi_0525 at 594.614 kb on + strand, within Echvi_0525 at 594.651 kb on + strand, within Echvi_0525 at 594.651 kb on + strand, within Echvi_0525 at 594.651 kb on + strand, within Echvi_0525 at 594.651 kb on + strand, within Echvi_0525 at 594.658 kb on + strand, within Echvi_0525 at 594.658 kb on + strand, within Echvi_0525 at 594.658 kb on + strand, within Echvi_0525 at 594.659 kb on - strand, within Echvi_0525 at 594.659 kb on - strand, within Echvi_0525 at 594.722 kb on + strand, within Echvi_0525 at 594.780 kb on + strand, within Echvi_0525 at 594.781 kb on - strand, within Echvi_0525 at 594.781 kb on - strand, within Echvi_0525 at 594.801 kb on - strand, within Echvi_0525 at 594.814 kb on - strand, within Echvi_0525 at 594.818 kb on + strand, within Echvi_0525 at 594.823 kb on + strand, within Echvi_0525 at 594.823 kb on + strand, within Echvi_0525 at 594.823 kb on + strand, within Echvi_0525 at 594.824 kb on - strand, within Echvi_0525 at 594.862 kb on - strand, within Echvi_0525 at 594.893 kb on - strand, within Echvi_0525 at 594.913 kb on + strand, within Echvi_0525 at 594.913 kb on + strand, within Echvi_0525 at 594.913 kb on + strand, within Echvi_0525 at 594.913 kb on + strand, within Echvi_0525 at 594.916 kb on - strand, within Echvi_0525 at 594.918 kb on + strand, within Echvi_0525 at 594.919 kb on - strand, within Echvi_0525 at 594.919 kb on - strand, within Echvi_0525 at 594.984 kb on + strand, within Echvi_0525 at 594.984 kb on + strand, within Echvi_0525 at 594.985 kb on - strand, within Echvi_0525 at 594.986 kb on + strand, within Echvi_0525 at 594.986 kb on + strand, within Echvi_0525 at 594.986 kb on + strand, within Echvi_0525 at 594.986 kb on + strand, within Echvi_0525 at 594.987 kb on - strand, within Echvi_0525 at 594.987 kb on - strand, within Echvi_0525 at 594.987 kb on - strand, within Echvi_0525 at 595.060 kb on + strand, within Echvi_0525 at 595.061 kb on - strand, within Echvi_0525 at 595.073 kb on + strand at 595.073 kb on + strand at 595.073 kb on + strand at 595.074 kb on - strand at 595.086 kb on - strand at 595.110 kb on - strand at 595.113 kb on + strand at 595.114 kb on - strand at 595.114 kb on - strand at 595.114 kb on - strand at 595.140 kb on - strand at 595.142 kb on - strand at 595.175 kb on + strand at 595.176 kb on - strand at 595.176 kb on - strand at 595.179 kb on + strand at 595.183 kb on - strand at 595.183 kb on - strand at 595.183 kb on - strand at 595.183 kb on - strand at 595.185 kb on - strand at 595.227 kb on + strand at 595.227 kb on + strand at 595.231 kb on + strand at 595.231 kb on + strand at 595.232 kb on - strand at 595.233 kb on + strand at 595.233 kb on + strand at 595.233 kb on + strand at 595.234 kb on - strand at 595.235 kb on + strand at 595.235 kb on + strand at 595.239 kb on + strand at 595.239 kb on + strand at 595.245 kb on + strand at 595.254 kb on + strand at 595.254 kb on + strand at 595.255 kb on - strand at 595.255 kb on - strand at 595.259 kb on + strand at 595.259 kb on + strand at 595.263 kb on + strand at 595.263 kb on + strand at 595.276 kb on + strand at 595.276 kb on + strand at 595.285 kb on + strand at 595.285 kb on + strand at 595.286 kb on - strand at 595.373 kb on - strand at 595.376 kb on + strand at 595.376 kb on + strand at 595.376 kb on + strand at 595.376 kb on + strand at 595.376 kb on + strand at 595.377 kb on - strand at 595.377 kb on - strand at 595.377 kb on - strand at 595.393 kb on - strand at 595.431 kb on + strand at 595.468 kb on - strand at 595.474 kb on - strand at 595.480 kb on + strand at 595.484 kb on - strand at 595.484 kb on - strand at 595.520 kb on + strand, within Echvi_0527 at 595.520 kb on + strand, within Echvi_0527 at 595.521 kb on - strand, within Echvi_0527 at 595.561 kb on - strand, within Echvi_0527 at 595.572 kb on + strand, within Echvi_0527 at 595.619 kb on - strand, within Echvi_0527 at 595.619 kb on - strand, within Echvi_0527 at 595.619 kb on - strand, within Echvi_0527 at 595.622 kb on - strand, within Echvi_0527 at 595.622 kb on - strand, within Echvi_0527 at 595.622 kb on - strand, within Echvi_0527 at 595.668 kb on - strand, within Echvi_0527 at 595.668 kb on - strand, within Echvi_0527 at 595.672 kb on - strand, within Echvi_0527 at 595.672 kb on - strand, within Echvi_0527 at 595.675 kb on - strand, within Echvi_0527 at 595.675 kb on - strand, within Echvi_0527
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 593,557 - Echvi_0524 0.62 -1.8 593,627 + Echvi_0524 0.66 +1.0 593,627 + Echvi_0524 0.66 +0.7 593,696 + Echvi_0524 0.70 -1.1 593,696 + Echvi_0524 0.70 +1.2 593,696 + Echvi_0524 0.70 +0.4 593,696 + Echvi_0524 0.70 +0.8 593,696 + Echvi_0524 0.70 -1.2 593,696 + Echvi_0524 0.70 -0.4 593,696 + Echvi_0524 0.70 -1.9 593,697 - Echvi_0524 0.70 -1.0 593,720 - Echvi_0524 0.71 -0.3 593,778 + Echvi_0524 0.74 +1.2 593,850 - Echvi_0524 0.77 +0.6 593,890 + Echvi_0524 0.79 +1.1 593,890 + Echvi_0524 0.79 +0.4 593,890 + Echvi_0524 0.79 +1.2 593,891 - Echvi_0524 0.79 -1.8 593,891 - Echvi_0524 0.79 -0.8 594,007 + Echvi_0524 0.85 +0.1 594,007 + Echvi_0524 0.85 -2.4 594,069 + Echvi_0524 0.89 -3.2 594,104 + +1.0 594,104 + +0.4 594,126 - -0.6 594,158 + -1.2 594,159 - -2.3 594,180 + +0.3 594,180 + +1.2 594,232 - -2.5 594,254 - +0.3 594,254 - -0.9 594,254 - -3.0 594,283 - +0.3 594,285 - -2.4 594,292 - -1.3 594,305 + +0.1 594,325 - -1.1 594,351 + +1.0 594,367 + +1.0 594,398 + +0.4 594,460 - -0.2 594,465 - +0.5 594,471 + -0.5 594,471 + +0.0 594,589 + Echvi_0525 0.19 -0.5 594,589 + Echvi_0525 0.19 +1.3 594,592 + Echvi_0525 0.20 +1.1 594,593 - Echvi_0525 0.20 -1.6 594,593 - Echvi_0525 0.20 -1.7 594,593 - Echvi_0525 0.20 -3.4 594,607 + Echvi_0525 0.22 -2.4 594,609 + Echvi_0525 0.22 +0.5 594,609 + Echvi_0525 0.22 +0.8 594,610 - Echvi_0525 0.23 +0.0 594,612 + Echvi_0525 0.23 +1.4 594,612 + Echvi_0525 0.23 -1.2 594,612 + Echvi_0525 0.23 +0.3 594,613 - Echvi_0525 0.23 +1.2 594,614 + Echvi_0525 0.23 +0.6 594,614 + Echvi_0525 0.23 -1.0 594,614 + Echvi_0525 0.23 -2.2 594,614 + Echvi_0525 0.23 -0.2 594,614 + Echvi_0525 0.23 +1.6 594,614 + Echvi_0525 0.23 +1.8 594,651 + Echvi_0525 0.29 -0.8 594,651 + Echvi_0525 0.29 +3.8 594,651 + Echvi_0525 0.29 +0.3 594,651 + Echvi_0525 0.29 +0.1 594,658 + Echvi_0525 0.30 +0.4 594,658 + Echvi_0525 0.30 +0.4 594,658 + Echvi_0525 0.30 -0.6 594,659 - Echvi_0525 0.30 -0.2 594,659 - Echvi_0525 0.30 -0.7 594,722 + Echvi_0525 0.39 +0.1 594,780 + Echvi_0525 0.48 -2.0 594,781 - Echvi_0525 0.48 +1.3 594,781 - Echvi_0525 0.48 -1.7 594,801 - Echvi_0525 0.51 +0.2 594,814 - Echvi_0525 0.53 +0.2 594,818 + Echvi_0525 0.53 +1.1 594,823 + Echvi_0525 0.54 -1.2 594,823 + Echvi_0525 0.54 -0.2 594,823 + Echvi_0525 0.54 +3.0 594,824 - Echvi_0525 0.54 -0.6 594,862 - Echvi_0525 0.60 -0.3 594,893 - Echvi_0525 0.64 +2.0 594,913 + Echvi_0525 0.67 -1.3 594,913 + Echvi_0525 0.67 +0.4 594,913 + Echvi_0525 0.67 +0.1 594,913 + Echvi_0525 0.67 +0.3 594,916 - Echvi_0525 0.68 +0.4 594,918 + Echvi_0525 0.68 -2.1 594,919 - Echvi_0525 0.68 +0.2 594,919 - Echvi_0525 0.68 -0.0 594,984 + Echvi_0525 0.78 +0.7 594,984 + Echvi_0525 0.78 +2.0 594,985 - Echvi_0525 0.78 -0.4 594,986 + Echvi_0525 0.78 +0.3 594,986 + Echvi_0525 0.78 -1.4 594,986 + Echvi_0525 0.78 +2.2 594,986 + Echvi_0525 0.78 -1.3 594,987 - Echvi_0525 0.78 +0.5 594,987 - Echvi_0525 0.78 +1.2 594,987 - Echvi_0525 0.78 +2.0 595,060 + Echvi_0525 0.89 -2.2 595,061 - Echvi_0525 0.89 +0.6 595,073 + +0.2 595,073 + +3.0 595,073 + -0.1 595,074 - -1.6 595,086 - -2.2 595,110 - +0.7 595,113 + +0.3 595,114 - +0.8 595,114 - -0.6 595,114 - -0.9 595,140 - +1.4 595,142 - +0.0 595,175 + -0.8 595,176 - -1.1 595,176 - +0.3 595,179 + +0.0 595,183 - +1.6 595,183 - +0.9 595,183 - +0.3 595,183 - -2.4 595,185 - +1.5 595,227 + -0.9 595,227 + +0.8 595,231 + +0.1 595,231 + -0.4 595,232 - +0.4 595,233 + -0.7 595,233 + -0.1 595,233 + -0.3 595,234 - -0.7 595,235 + -0.4 595,235 + +0.4 595,239 + +0.8 595,239 + +1.0 595,245 + -1.9 595,254 + +2.0 595,254 + +1.8 595,255 - -1.3 595,255 - -1.0 595,259 + -1.2 595,259 + -2.4 595,263 + +0.1 595,263 + +0.2 595,276 + -0.7 595,276 + +0.6 595,285 + -0.4 595,285 + -0.2 595,286 - -0.6 595,373 - -0.3 595,376 + +0.8 595,376 + -1.4 595,376 + +0.5 595,376 + +0.7 595,376 + +0.9 595,377 - -2.6 595,377 - -0.2 595,377 - -0.2 595,393 - -1.9 595,431 + +0.3 595,468 - +0.2 595,474 - +0.9 595,480 + -1.9 595,484 - -1.8 595,484 - +0.5 595,520 + Echvi_0527 0.19 -1.8 595,520 + Echvi_0527 0.19 +1.4 595,521 - Echvi_0527 0.20 -0.2 595,561 - Echvi_0527 0.36 -0.3 595,572 + Echvi_0527 0.40 +0.1 595,619 - Echvi_0527 0.59 -1.0 595,619 - Echvi_0527 0.59 +0.6 595,619 - Echvi_0527 0.59 -0.3 595,622 - Echvi_0527 0.60 -3.2 595,622 - Echvi_0527 0.60 -0.6 595,622 - Echvi_0527 0.60 -0.7 595,668 - Echvi_0527 0.79 -0.4 595,668 - Echvi_0527 0.79 +0.0 595,672 - Echvi_0527 0.80 -0.6 595,672 - Echvi_0527 0.80 -0.4 595,675 - Echvi_0527 0.82 -0.0 595,675 - Echvi_0527 0.82 -0.4
Or see this region's nucleotide sequence