Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0497 and Echvi_0498 are separated by 68 nucleotides Echvi_0498 and Echvi_0499 are separated by 191 nucleotides
Echvi_0497: Echvi_0497 - Beta-xylosidase, at 553,517 to 554,560
_0497
Echvi_0498: Echvi_0498 - hypothetical protein, at 554,629 to 555,726
_0498
Echvi_0499: Echvi_0499 - Glycosyl hydrolases family 43., at 555,918 to 556,859
_0499
Position (kb) 554
555
556 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 553.667 kb on - strand, within Echvi_0497 at 553.669 kb on + strand, within Echvi_0497 at 553.669 kb on + strand, within Echvi_0497 at 553.670 kb on - strand, within Echvi_0497 at 553.683 kb on + strand, within Echvi_0497 at 553.683 kb on + strand, within Echvi_0497 at 553.684 kb on - strand, within Echvi_0497 at 553.698 kb on + strand, within Echvi_0497 at 553.708 kb on - strand, within Echvi_0497 at 553.708 kb on - strand, within Echvi_0497 at 553.736 kb on + strand, within Echvi_0497 at 553.783 kb on - strand, within Echvi_0497 at 553.783 kb on - strand, within Echvi_0497 at 553.787 kb on - strand, within Echvi_0497 at 553.795 kb on - strand, within Echvi_0497 at 553.799 kb on - strand, within Echvi_0497 at 553.876 kb on + strand, within Echvi_0497 at 553.886 kb on - strand, within Echvi_0497 at 553.908 kb on + strand, within Echvi_0497 at 553.950 kb on + strand, within Echvi_0497 at 553.950 kb on + strand, within Echvi_0497 at 553.951 kb on - strand, within Echvi_0497 at 553.951 kb on - strand, within Echvi_0497 at 553.951 kb on - strand, within Echvi_0497 at 553.951 kb on - strand, within Echvi_0497 at 554.057 kb on - strand, within Echvi_0497 at 554.071 kb on - strand, within Echvi_0497 at 554.146 kb on + strand, within Echvi_0497 at 554.146 kb on + strand, within Echvi_0497 at 554.146 kb on + strand, within Echvi_0497 at 554.146 kb on + strand, within Echvi_0497 at 554.147 kb on - strand, within Echvi_0497 at 554.160 kb on - strand, within Echvi_0497 at 554.363 kb on + strand, within Echvi_0497 at 554.467 kb on - strand at 554.546 kb on - strand at 554.546 kb on - strand at 554.549 kb on + strand at 554.549 kb on + strand at 554.550 kb on - strand at 554.550 kb on - strand at 554.550 kb on - strand at 554.550 kb on - strand at 554.587 kb on + strand at 554.587 kb on + strand at 554.588 kb on - strand at 554.588 kb on - strand at 554.588 kb on - strand at 554.606 kb on + strand at 554.607 kb on - strand at 554.609 kb on - strand at 554.752 kb on - strand, within Echvi_0498 at 554.777 kb on - strand, within Echvi_0498 at 554.777 kb on - strand, within Echvi_0498 at 554.825 kb on + strand, within Echvi_0498 at 554.826 kb on - strand, within Echvi_0498 at 554.829 kb on + strand, within Echvi_0498 at 554.834 kb on + strand, within Echvi_0498 at 554.930 kb on + strand, within Echvi_0498 at 555.039 kb on + strand, within Echvi_0498 at 555.075 kb on + strand, within Echvi_0498 at 555.075 kb on + strand, within Echvi_0498 at 555.119 kb on + strand, within Echvi_0498 at 555.119 kb on + strand, within Echvi_0498 at 555.122 kb on + strand, within Echvi_0498 at 555.122 kb on + strand, within Echvi_0498 at 555.123 kb on - strand, within Echvi_0498 at 555.123 kb on - strand, within Echvi_0498 at 555.123 kb on - strand, within Echvi_0498 at 555.123 kb on - strand, within Echvi_0498 at 555.156 kb on + strand, within Echvi_0498 at 555.158 kb on + strand, within Echvi_0498 at 555.161 kb on + strand, within Echvi_0498 at 555.161 kb on + strand, within Echvi_0498 at 555.162 kb on - strand, within Echvi_0498 at 555.191 kb on + strand, within Echvi_0498 at 555.220 kb on + strand, within Echvi_0498 at 555.238 kb on - strand, within Echvi_0498 at 555.280 kb on - strand, within Echvi_0498 at 555.391 kb on + strand, within Echvi_0498 at 555.391 kb on + strand, within Echvi_0498 at 555.438 kb on + strand, within Echvi_0498 at 555.439 kb on - strand, within Echvi_0498 at 555.439 kb on - strand, within Echvi_0498 at 555.629 kb on - strand at 555.652 kb on - strand at 555.652 kb on - strand at 555.721 kb on - strand at 555.721 kb on - strand at 555.721 kb on - strand at 555.794 kb on + strand at 555.850 kb on + strand at 555.850 kb on + strand at 555.850 kb on + strand at 555.850 kb on + strand at 555.851 kb on - strand at 555.866 kb on - strand at 555.880 kb on - strand at 555.880 kb on - strand at 555.883 kb on - strand at 555.887 kb on + strand at 555.888 kb on - strand at 555.914 kb on - strand at 555.917 kb on + strand at 556.045 kb on - strand, within Echvi_0499 at 556.086 kb on - strand, within Echvi_0499 at 556.139 kb on + strand, within Echvi_0499 at 556.140 kb on - strand, within Echvi_0499 at 556.209 kb on + strand, within Echvi_0499 at 556.210 kb on - strand, within Echvi_0499 at 556.312 kb on - strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.332 kb on + strand, within Echvi_0499 at 556.333 kb on - strand, within Echvi_0499 at 556.334 kb on + strand, within Echvi_0499 at 556.334 kb on + strand, within Echvi_0499 at 556.335 kb on - strand, within Echvi_0499 at 556.352 kb on + strand, within Echvi_0499 at 556.352 kb on + strand, within Echvi_0499 at 556.353 kb on - strand, within Echvi_0499 at 556.355 kb on + strand, within Echvi_0499 at 556.402 kb on - strand, within Echvi_0499 at 556.409 kb on + strand, within Echvi_0499 at 556.409 kb on + strand, within Echvi_0499 at 556.409 kb on + strand, within Echvi_0499 at 556.410 kb on - strand, within Echvi_0499 at 556.410 kb on - strand, within Echvi_0499 at 556.416 kb on + strand, within Echvi_0499 at 556.416 kb on + strand, within Echvi_0499 at 556.416 kb on + strand, within Echvi_0499 at 556.416 kb on + strand, within Echvi_0499 at 556.417 kb on - strand, within Echvi_0499 at 556.417 kb on - strand, within Echvi_0499 at 556.421 kb on + strand, within Echvi_0499 at 556.422 kb on - strand, within Echvi_0499 at 556.422 kb on - strand, within Echvi_0499 at 556.521 kb on + strand, within Echvi_0499 at 556.522 kb on - strand, within Echvi_0499 at 556.522 kb on - strand, within Echvi_0499 at 556.697 kb on + strand, within Echvi_0499 at 556.701 kb on + strand, within Echvi_0499 at 556.701 kb on + strand, within Echvi_0499 at 556.701 kb on + strand, within Echvi_0499 at 556.702 kb on - strand, within Echvi_0499
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 553,667 - Echvi_0497 0.14 -1.1 553,669 + Echvi_0497 0.15 +0.7 553,669 + Echvi_0497 0.15 -1.0 553,670 - Echvi_0497 0.15 -3.0 553,683 + Echvi_0497 0.16 -1.3 553,683 + Echvi_0497 0.16 -0.2 553,684 - Echvi_0497 0.16 -2.6 553,698 + Echvi_0497 0.17 -1.2 553,708 - Echvi_0497 0.18 -1.3 553,708 - Echvi_0497 0.18 +0.2 553,736 + Echvi_0497 0.21 +1.0 553,783 - Echvi_0497 0.25 -1.7 553,783 - Echvi_0497 0.25 -2.6 553,787 - Echvi_0497 0.26 -1.1 553,795 - Echvi_0497 0.27 -0.0 553,799 - Echvi_0497 0.27 -1.3 553,876 + Echvi_0497 0.34 -0.9 553,886 - Echvi_0497 0.35 -0.1 553,908 + Echvi_0497 0.37 -0.9 553,950 + Echvi_0497 0.41 -0.2 553,950 + Echvi_0497 0.41 -0.7 553,951 - Echvi_0497 0.42 -0.1 553,951 - Echvi_0497 0.42 -1.4 553,951 - Echvi_0497 0.42 -1.5 553,951 - Echvi_0497 0.42 -0.9 554,057 - Echvi_0497 0.52 -0.8 554,071 - Echvi_0497 0.53 -0.6 554,146 + Echvi_0497 0.60 +0.9 554,146 + Echvi_0497 0.60 +0.9 554,146 + Echvi_0497 0.60 -0.7 554,146 + Echvi_0497 0.60 -0.3 554,147 - Echvi_0497 0.60 +1.1 554,160 - Echvi_0497 0.62 +1.1 554,363 + Echvi_0497 0.81 -0.8 554,467 - -0.3 554,546 - +0.3 554,546 - -1.6 554,549 + +1.4 554,549 + -1.7 554,550 - -0.4 554,550 - +1.2 554,550 - +0.4 554,550 - +1.1 554,587 + -0.2 554,587 + +0.4 554,588 - -2.5 554,588 - +1.0 554,588 - -1.9 554,606 + -1.0 554,607 - -1.4 554,609 - +0.9 554,752 - Echvi_0498 0.11 +1.0 554,777 - Echvi_0498 0.13 -1.1 554,777 - Echvi_0498 0.13 +0.2 554,825 + Echvi_0498 0.18 -0.4 554,826 - Echvi_0498 0.18 -0.7 554,829 + Echvi_0498 0.18 -2.0 554,834 + Echvi_0498 0.19 +0.4 554,930 + Echvi_0498 0.27 -0.1 555,039 + Echvi_0498 0.37 -1.7 555,075 + Echvi_0498 0.41 +0.4 555,075 + Echvi_0498 0.41 +0.8 555,119 + Echvi_0498 0.45 +0.8 555,119 + Echvi_0498 0.45 +0.6 555,122 + Echvi_0498 0.45 +0.5 555,122 + Echvi_0498 0.45 -1.5 555,123 - Echvi_0498 0.45 +0.9 555,123 - Echvi_0498 0.45 +1.1 555,123 - Echvi_0498 0.45 +0.7 555,123 - Echvi_0498 0.45 +0.2 555,156 + Echvi_0498 0.48 +0.2 555,158 + Echvi_0498 0.48 +0.7 555,161 + Echvi_0498 0.48 -1.2 555,161 + Echvi_0498 0.48 +0.9 555,162 - Echvi_0498 0.49 -1.0 555,191 + Echvi_0498 0.51 -0.3 555,220 + Echvi_0498 0.54 +0.1 555,238 - Echvi_0498 0.55 +1.0 555,280 - Echvi_0498 0.59 +2.5 555,391 + Echvi_0498 0.69 -1.7 555,391 + Echvi_0498 0.69 -0.0 555,438 + Echvi_0498 0.74 -2.4 555,439 - Echvi_0498 0.74 -0.5 555,439 - Echvi_0498 0.74 -0.9 555,629 - -1.2 555,652 - +1.3 555,652 - -1.4 555,721 - -2.4 555,721 - -0.6 555,721 - -0.3 555,794 + +1.3 555,850 + -0.6 555,850 + -2.5 555,850 + -1.9 555,850 + -1.2 555,851 - +0.3 555,866 - -0.0 555,880 - +0.6 555,880 - -0.3 555,883 - -1.5 555,887 + -1.0 555,888 - +0.8 555,914 - -1.6 555,917 + -0.5 556,045 - Echvi_0499 0.13 -0.6 556,086 - Echvi_0499 0.18 +0.1 556,139 + Echvi_0499 0.23 -1.7 556,140 - Echvi_0499 0.24 -1.6 556,209 + Echvi_0499 0.31 -0.6 556,210 - Echvi_0499 0.31 +1.7 556,312 - Echvi_0499 0.42 +0.5 556,332 + Echvi_0499 0.44 -0.3 556,332 + Echvi_0499 0.44 +0.3 556,332 + Echvi_0499 0.44 +0.5 556,332 + Echvi_0499 0.44 +0.4 556,332 + Echvi_0499 0.44 +0.5 556,332 + Echvi_0499 0.44 -0.6 556,332 + Echvi_0499 0.44 +0.8 556,333 - Echvi_0499 0.44 +2.0 556,334 + Echvi_0499 0.44 -0.0 556,334 + Echvi_0499 0.44 -2.1 556,335 - Echvi_0499 0.44 -0.5 556,352 + Echvi_0499 0.46 -2.0 556,352 + Echvi_0499 0.46 +0.9 556,353 - Echvi_0499 0.46 -1.6 556,355 + Echvi_0499 0.46 +2.0 556,402 - Echvi_0499 0.51 -0.6 556,409 + Echvi_0499 0.52 +0.4 556,409 + Echvi_0499 0.52 -2.2 556,409 + Echvi_0499 0.52 +0.6 556,410 - Echvi_0499 0.52 +2.0 556,410 - Echvi_0499 0.52 -1.0 556,416 + Echvi_0499 0.53 +0.4 556,416 + Echvi_0499 0.53 -1.5 556,416 + Echvi_0499 0.53 +1.7 556,416 + Echvi_0499 0.53 +1.8 556,417 - Echvi_0499 0.53 +0.7 556,417 - Echvi_0499 0.53 +1.0 556,421 + Echvi_0499 0.53 +2.6 556,422 - Echvi_0499 0.54 -0.1 556,422 - Echvi_0499 0.54 -1.1 556,521 + Echvi_0499 0.64 -0.2 556,522 - Echvi_0499 0.64 -0.7 556,522 - Echvi_0499 0.64 -0.1 556,697 + Echvi_0499 0.83 -1.5 556,701 + Echvi_0499 0.83 -1.8 556,701 + Echvi_0499 0.83 +1.0 556,701 + Echvi_0499 0.83 +1.0 556,702 - Echvi_0499 0.83 +1.2
Or see this region's nucleotide sequence