Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0364 and Echvi_0365 are separated by 281 nucleotides Echvi_0365 and Echvi_0366 are separated by 160 nucleotides
Echvi_0364: Echvi_0364 - hypothetical protein, at 391,513 to 392,265
_0364
Echvi_0365: Echvi_0365 - adenylosuccinate lyase, at 392,547 to 393,890
_0365
Echvi_0366: Echvi_0366 - Uncharacterized protein conserved in bacteria containing a pentein-type domain, at 394,051 to 394,995
_0366
Position (kb) 392
393
394 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 391.566 kb on - strand at 391.654 kb on + strand, within Echvi_0364 at 391.654 kb on + strand, within Echvi_0364 at 391.654 kb on + strand, within Echvi_0364 at 391.654 kb on + strand, within Echvi_0364 at 391.654 kb on + strand, within Echvi_0364 at 391.654 kb on + strand, within Echvi_0364 at 391.655 kb on - strand, within Echvi_0364 at 391.655 kb on - strand, within Echvi_0364 at 391.655 kb on - strand, within Echvi_0364 at 391.655 kb on - strand, within Echvi_0364 at 391.658 kb on + strand, within Echvi_0364 at 391.666 kb on + strand, within Echvi_0364 at 391.703 kb on - strand, within Echvi_0364 at 391.730 kb on - strand, within Echvi_0364 at 391.735 kb on - strand, within Echvi_0364 at 391.735 kb on - strand, within Echvi_0364 at 391.735 kb on - strand, within Echvi_0364 at 391.739 kb on - strand, within Echvi_0364 at 391.751 kb on - strand, within Echvi_0364 at 391.751 kb on - strand, within Echvi_0364 at 391.760 kb on - strand, within Echvi_0364 at 391.780 kb on + strand, within Echvi_0364 at 391.917 kb on - strand, within Echvi_0364 at 391.917 kb on - strand, within Echvi_0364 at 392.008 kb on + strand, within Echvi_0364 at 392.008 kb on + strand, within Echvi_0364 at 392.008 kb on + strand, within Echvi_0364 at 392.008 kb on + strand, within Echvi_0364 at 392.112 kb on + strand, within Echvi_0364 at 392.166 kb on - strand, within Echvi_0364 at 392.168 kb on - strand, within Echvi_0364 at 392.168 kb on - strand, within Echvi_0364 at 392.169 kb on + strand, within Echvi_0364 at 392.169 kb on + strand, within Echvi_0364 at 392.169 kb on + strand, within Echvi_0364 at 392.170 kb on - strand, within Echvi_0364 at 392.180 kb on + strand, within Echvi_0364 at 392.189 kb on - strand, within Echvi_0364 at 392.295 kb on + strand at 392.450 kb on - strand at 392.457 kb on - strand at 392.500 kb on + strand at 392.524 kb on + strand at 393.896 kb on - strand at 393.923 kb on + strand at 393.923 kb on + strand at 393.923 kb on + strand at 393.923 kb on + strand at 393.924 kb on - strand at 393.930 kb on + strand at 393.930 kb on + strand at 394.029 kb on + strand at 394.104 kb on + strand at 394.135 kb on - strand at 394.161 kb on + strand, within Echvi_0366 at 394.162 kb on - strand, within Echvi_0366 at 394.163 kb on + strand, within Echvi_0366 at 394.195 kb on - strand, within Echvi_0366 at 394.206 kb on - strand, within Echvi_0366 at 394.263 kb on + strand, within Echvi_0366 at 394.263 kb on + strand, within Echvi_0366 at 394.263 kb on + strand, within Echvi_0366 at 394.263 kb on + strand, within Echvi_0366 at 394.264 kb on - strand, within Echvi_0366 at 394.264 kb on - strand, within Echvi_0366 at 394.440 kb on + strand, within Echvi_0366 at 394.440 kb on + strand, within Echvi_0366 at 394.440 kb on + strand, within Echvi_0366 at 394.542 kb on - strand, within Echvi_0366 at 394.618 kb on - strand, within Echvi_0366 at 394.642 kb on - strand, within Echvi_0366 at 394.660 kb on + strand, within Echvi_0366 at 394.661 kb on - strand, within Echvi_0366 at 394.661 kb on - strand, within Echvi_0366 at 394.666 kb on + strand, within Echvi_0366 at 394.720 kb on + strand, within Echvi_0366
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 391,566 - +0.2 391,654 + Echvi_0364 0.19 -0.2 391,654 + Echvi_0364 0.19 -1.3 391,654 + Echvi_0364 0.19 -2.6 391,654 + Echvi_0364 0.19 +0.4 391,654 + Echvi_0364 0.19 +0.3 391,654 + Echvi_0364 0.19 -0.7 391,655 - Echvi_0364 0.19 +1.3 391,655 - Echvi_0364 0.19 +0.8 391,655 - Echvi_0364 0.19 +0.1 391,655 - Echvi_0364 0.19 +0.5 391,658 + Echvi_0364 0.19 -1.7 391,666 + Echvi_0364 0.20 -1.1 391,703 - Echvi_0364 0.25 +0.7 391,730 - Echvi_0364 0.29 -0.2 391,735 - Echvi_0364 0.29 +1.9 391,735 - Echvi_0364 0.29 +2.8 391,735 - Echvi_0364 0.29 -0.1 391,739 - Echvi_0364 0.30 +0.1 391,751 - Echvi_0364 0.32 +1.9 391,751 - Echvi_0364 0.32 -1.3 391,760 - Echvi_0364 0.33 -0.2 391,780 + Echvi_0364 0.35 -1.2 391,917 - Echvi_0364 0.54 -1.0 391,917 - Echvi_0364 0.54 +2.0 392,008 + Echvi_0364 0.66 -1.0 392,008 + Echvi_0364 0.66 +0.7 392,008 + Echvi_0364 0.66 -0.5 392,008 + Echvi_0364 0.66 +1.9 392,112 + Echvi_0364 0.80 -2.3 392,166 - Echvi_0364 0.87 -0.6 392,168 - Echvi_0364 0.87 +0.2 392,168 - Echvi_0364 0.87 -1.2 392,169 + Echvi_0364 0.87 -0.5 392,169 + Echvi_0364 0.87 +0.1 392,169 + Echvi_0364 0.87 -0.7 392,170 - Echvi_0364 0.87 +0.1 392,180 + Echvi_0364 0.89 +0.6 392,189 - Echvi_0364 0.90 -0.2 392,295 + +0.0 392,450 - +0.2 392,457 - +2.1 392,500 + -1.6 392,524 + +0.2 393,896 - -1.0 393,923 + +0.9 393,923 + -0.8 393,923 + +2.5 393,923 + +0.3 393,924 - +0.6 393,930 + +2.1 393,930 + -0.1 394,029 + -0.3 394,104 + -1.1 394,135 - +0.1 394,161 + Echvi_0366 0.12 -0.2 394,162 - Echvi_0366 0.12 -1.1 394,163 + Echvi_0366 0.12 -0.5 394,195 - Echvi_0366 0.15 -0.8 394,206 - Echvi_0366 0.16 +0.1 394,263 + Echvi_0366 0.22 -1.6 394,263 + Echvi_0366 0.22 +1.8 394,263 + Echvi_0366 0.22 -1.8 394,263 + Echvi_0366 0.22 -1.5 394,264 - Echvi_0366 0.23 +0.7 394,264 - Echvi_0366 0.23 -1.2 394,440 + Echvi_0366 0.41 +0.8 394,440 + Echvi_0366 0.41 +0.5 394,440 + Echvi_0366 0.41 -0.8 394,542 - Echvi_0366 0.52 -0.8 394,618 - Echvi_0366 0.60 +0.2 394,642 - Echvi_0366 0.63 +1.0 394,660 + Echvi_0366 0.64 -0.1 394,661 - Echvi_0366 0.65 -0.1 394,661 - Echvi_0366 0.65 -1.1 394,666 + Echvi_0366 0.65 +0.5 394,720 + Echvi_0366 0.71 -0.0
Or see this region's nucleotide sequence