Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0311

Experiment: L-tyrosine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntEchvi_0310 and Echvi_0311 are separated by 38 nucleotidesEchvi_0311 and Echvi_0312 overlap by 4 nucleotides Echvi_0310: Echvi_0310 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase, at 321,837 to 322,919 _0310 Echvi_0311: Echvi_0311 - Bacterial cell division membrane protein, at 322,958 to 324,127 _0311 Echvi_0312: Echvi_0312 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 324,124 to 325,473 _0312 Position (kb) 322 323 324 325Strain fitness (log2 ratio) -1 0 1at 322.992 kb on - strandat 322.994 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
remove
322,992 - -1.7
322,994 - -1.4

Or see this region's nucleotide sequence