Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0277 and Echvi_0278 are separated by 516 nucleotides Echvi_0278 and Echvi_0279 are separated by 183 nucleotides
Echvi_0277: Echvi_0277 - ribosome recycling factor, at 280,523 to 281,083
_0277
Echvi_0278: Echvi_0278 - hypothetical protein, at 281,600 to 281,740
_0278
Echvi_0279: Echvi_0279 - hypothetical protein, at 281,924 to 284,566
_0279
Position (kb) 281
282
283
284
285 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 281.081 kb on + strand at 281.081 kb on + strand at 281.081 kb on + strand at 281.081 kb on + strand at 281.082 kb on - strand at 281.085 kb on + strand at 281.101 kb on - strand at 281.101 kb on - strand at 281.143 kb on - strand at 281.143 kb on - strand at 281.147 kb on + strand at 281.147 kb on + strand at 281.148 kb on - strand at 281.148 kb on - strand at 281.192 kb on + strand at 281.195 kb on + strand at 281.200 kb on + strand at 281.200 kb on + strand at 281.200 kb on + strand at 281.201 kb on - strand at 281.201 kb on - strand at 281.201 kb on - strand at 281.201 kb on - strand at 281.258 kb on + strand at 281.259 kb on - strand at 281.334 kb on + strand at 281.347 kb on + strand at 281.353 kb on + strand at 281.449 kb on - strand at 281.452 kb on + strand at 281.482 kb on - strand at 281.484 kb on + strand at 281.509 kb on + strand at 281.509 kb on + strand at 281.509 kb on + strand at 281.510 kb on - strand at 281.510 kb on - strand at 281.510 kb on - strand at 281.510 kb on - strand at 281.512 kb on + strand at 281.512 kb on + strand at 281.513 kb on - strand at 281.519 kb on + strand at 281.519 kb on + strand at 281.551 kb on - strand at 281.551 kb on - strand at 281.551 kb on - strand at 281.551 kb on - strand at 281.554 kb on + strand at 281.554 kb on + strand at 281.555 kb on - strand at 281.555 kb on - strand at 281.555 kb on - strand at 281.625 kb on - strand, within Echvi_0278 at 281.625 kb on - strand, within Echvi_0278 at 281.637 kb on + strand, within Echvi_0278 at 281.638 kb on - strand, within Echvi_0278 at 281.638 kb on - strand, within Echvi_0278 at 281.644 kb on + strand, within Echvi_0278 at 281.644 kb on + strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.645 kb on - strand, within Echvi_0278 at 281.646 kb on + strand, within Echvi_0278 at 281.647 kb on - strand, within Echvi_0278 at 281.714 kb on + strand, within Echvi_0278 at 281.718 kb on - strand, within Echvi_0278 at 281.726 kb on - strand, within Echvi_0278 at 281.728 kb on + strand at 281.728 kb on + strand at 281.728 kb on + strand at 281.728 kb on + strand at 281.729 kb on - strand at 281.729 kb on - strand at 281.729 kb on - strand at 281.729 kb on - strand at 281.731 kb on + strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.732 kb on - strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.735 kb on + strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 281.741 kb on - strand at 281.750 kb on + strand at 281.803 kb on - strand at 281.813 kb on + strand at 281.814 kb on - strand at 281.814 kb on - strand at 281.815 kb on + strand at 281.816 kb on - strand at 281.901 kb on - strand at 281.944 kb on + strand at 281.945 kb on - strand at 281.947 kb on + strand at 281.957 kb on + strand at 281.985 kb on + strand at 282.093 kb on + strand at 282.093 kb on + strand at 282.172 kb on - strand at 282.214 kb on + strand, within Echvi_0279 at 282.214 kb on + strand, within Echvi_0279 at 282.219 kb on + strand, within Echvi_0279 at 282.234 kb on + strand at 282.235 kb on - strand, within Echvi_0279 at 282.256 kb on + strand, within Echvi_0279 at 282.291 kb on + strand, within Echvi_0279 at 282.292 kb on - strand, within Echvi_0279 at 282.304 kb on - strand, within Echvi_0279 at 282.455 kb on - strand, within Echvi_0279 at 282.481 kb on + strand, within Echvi_0279 at 282.496 kb on - strand, within Echvi_0279 at 282.520 kb on - strand, within Echvi_0279 at 282.624 kb on + strand, within Echvi_0279 at 282.624 kb on + strand, within Echvi_0279 at 282.625 kb on - strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.658 kb on + strand, within Echvi_0279 at 282.701 kb on + strand, within Echvi_0279 at 282.701 kb on + strand, within Echvi_0279 at 282.702 kb on - strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.703 kb on + strand, within Echvi_0279 at 282.704 kb on - strand, within Echvi_0279 at 282.704 kb on - strand, within Echvi_0279 at 282.704 kb on - strand, within Echvi_0279 at 282.778 kb on - strand, within Echvi_0279 at 282.849 kb on + strand, within Echvi_0279 at 282.855 kb on + strand, within Echvi_0279 at 282.855 kb on + strand, within Echvi_0279 at 282.877 kb on - strand, within Echvi_0279 at 282.887 kb on - strand, within Echvi_0279 at 282.972 kb on - strand, within Echvi_0279 at 282.986 kb on + strand, within Echvi_0279 at 283.045 kb on + strand, within Echvi_0279 at 283.046 kb on - strand, within Echvi_0279 at 283.122 kb on + strand, within Echvi_0279 at 283.136 kb on + strand, within Echvi_0279 at 283.136 kb on + strand, within Echvi_0279 at 283.137 kb on - strand, within Echvi_0279 at 283.290 kb on + strand, within Echvi_0279 at 283.291 kb on - strand, within Echvi_0279 at 283.340 kb on + strand, within Echvi_0279 at 283.341 kb on - strand, within Echvi_0279 at 283.341 kb on - strand, within Echvi_0279 at 283.346 kb on + strand, within Echvi_0279 at 283.427 kb on - strand, within Echvi_0279 at 283.500 kb on - strand, within Echvi_0279 at 283.568 kb on - strand, within Echvi_0279 at 283.578 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.582 kb on + strand, within Echvi_0279 at 283.583 kb on - strand, within Echvi_0279 at 283.585 kb on - strand, within Echvi_0279 at 283.595 kb on - strand, within Echvi_0279 at 283.622 kb on - strand, within Echvi_0279 at 283.623 kb on + strand, within Echvi_0279 at 283.624 kb on - strand, within Echvi_0279 at 283.624 kb on - strand, within Echvi_0279 at 283.624 kb on - strand, within Echvi_0279 at 283.668 kb on + strand, within Echvi_0279 at 283.669 kb on - strand, within Echvi_0279 at 283.723 kb on + strand, within Echvi_0279 at 283.724 kb on - strand, within Echvi_0279 at 283.736 kb on + strand, within Echvi_0279 at 283.737 kb on - strand, within Echvi_0279 at 283.737 kb on - strand, within Echvi_0279 at 283.737 kb on - strand, within Echvi_0279 at 283.750 kb on + strand, within Echvi_0279 at 283.750 kb on + strand, within Echvi_0279 at 283.752 kb on + strand, within Echvi_0279 at 283.752 kb on + strand, within Echvi_0279 at 283.752 kb on + strand, within Echvi_0279 at 283.753 kb on - strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.756 kb on + strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.757 kb on - strand, within Echvi_0279 at 283.808 kb on - strand, within Echvi_0279 at 283.849 kb on + strand, within Echvi_0279 at 283.850 kb on - strand, within Echvi_0279 at 283.930 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.932 kb on + strand, within Echvi_0279 at 283.954 kb on + strand, within Echvi_0279 at 283.954 kb on + strand, within Echvi_0279 at 283.982 kb on + strand, within Echvi_0279 at 283.983 kb on - strand, within Echvi_0279 at 284.044 kb on - strand, within Echvi_0279 at 284.129 kb on - strand, within Echvi_0279 at 284.253 kb on + strand, within Echvi_0279 at 284.254 kb on - strand, within Echvi_0279 at 284.351 kb on - strand at 284.355 kb on + strand at 284.356 kb on - strand at 284.356 kb on - strand at 284.356 kb on - strand at 284.356 kb on - strand at 284.359 kb on - strand at 284.423 kb on - strand at 284.443 kb on - strand at 284.546 kb on - strand at 284.567 kb on - strand at 284.586 kb on - strand at 284.605 kb on + strand at 284.620 kb on + strand at 284.649 kb on + strand at 284.776 kb on - strand at 284.776 kb on - strand at 284.776 kb on - strand at 284.798 kb on + strand at 284.959 kb on - strand at 285.042 kb on - strand at 285.042 kb on - strand at 285.042 kb on - strand at 285.042 kb on - strand at 285.049 kb on - strand at 285.049 kb on - strand at 285.049 kb on - strand at 285.067 kb on - strand at 285.067 kb on - strand at 285.178 kb on + strand at 285.178 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.366 kb on + strand at 285.368 kb on + strand at 285.368 kb on + strand at 285.368 kb on + strand at 285.440 kb on + strand at 285.440 kb on + strand at 285.440 kb on + strand at 285.441 kb on - strand at 285.451 kb on - strand at 285.507 kb on + strand at 285.523 kb on - strand at 285.525 kb on - strand at 285.551 kb on + strand at 285.551 kb on + strand at 285.551 kb on + strand at 285.564 kb on + strand at 285.565 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 281,081 + +0.4 281,081 + -0.8 281,081 + +1.6 281,081 + -2.0 281,082 - +0.9 281,085 + -0.1 281,101 - +1.4 281,101 - -0.1 281,143 - -2.1 281,143 - -0.3 281,147 + -0.5 281,147 + -0.2 281,148 - -2.1 281,148 - -0.2 281,192 + +0.7 281,195 + -0.5 281,200 + +0.1 281,200 + -1.6 281,200 + +0.0 281,201 - +0.1 281,201 - +1.3 281,201 - +1.6 281,201 - -1.0 281,258 + +0.0 281,259 - -0.9 281,334 + +0.7 281,347 + +1.3 281,353 + -1.5 281,449 - -0.3 281,452 + -0.1 281,482 - -0.8 281,484 + -1.9 281,509 + +2.2 281,509 + +1.1 281,509 + -0.4 281,510 - +0.4 281,510 - +0.7 281,510 - -0.0 281,510 - +2.6 281,512 + +1.0 281,512 + -1.4 281,513 - +1.9 281,519 + -1.4 281,519 + -0.7 281,551 - +0.5 281,551 - -0.7 281,551 - +1.8 281,551 - -2.0 281,554 + +0.1 281,554 + +2.1 281,555 - +0.4 281,555 - -1.5 281,555 - +0.7 281,625 - Echvi_0278 0.18 +0.3 281,625 - Echvi_0278 0.18 +0.2 281,637 + Echvi_0278 0.26 +1.4 281,638 - Echvi_0278 0.27 -1.1 281,638 - Echvi_0278 0.27 -1.6 281,644 + Echvi_0278 0.31 +0.6 281,644 + Echvi_0278 0.31 +0.7 281,645 - Echvi_0278 0.32 +2.1 281,645 - Echvi_0278 0.32 +0.4 281,645 - Echvi_0278 0.32 -1.1 281,645 - Echvi_0278 0.32 +1.4 281,645 - Echvi_0278 0.32 -0.4 281,646 + Echvi_0278 0.33 -0.0 281,647 - Echvi_0278 0.33 -0.3 281,714 + Echvi_0278 0.81 +0.2 281,718 - Echvi_0278 0.84 -1.3 281,726 - Echvi_0278 0.89 +1.0 281,728 + +0.9 281,728 + -0.4 281,728 + -0.5 281,728 + +0.3 281,729 - -2.1 281,729 - +1.7 281,729 - +0.1 281,729 - +0.2 281,731 + -1.5 281,732 - -3.1 281,732 - +0.8 281,732 - -0.2 281,732 - -0.4 281,732 - -1.2 281,732 - -0.3 281,732 - -1.1 281,732 - -0.5 281,735 + -0.7 281,735 + -0.4 281,735 + -0.7 281,735 + +0.4 281,735 + +1.2 281,735 + -0.1 281,735 + -0.2 281,735 + +0.4 281,736 - -0.4 281,736 - -1.8 281,736 - +0.9 281,736 - +0.5 281,736 - -0.2 281,736 - +1.5 281,741 - -0.4 281,750 + -2.0 281,803 - -2.2 281,813 + -2.1 281,814 - -0.5 281,814 - -0.5 281,815 + +0.1 281,816 - -2.5 281,901 - -0.8 281,944 + +0.3 281,945 - +0.8 281,947 + -0.4 281,957 + -0.5 281,985 + +0.9 282,093 + -2.2 282,093 + +0.6 282,172 - +0.6 282,214 + Echvi_0279 0.11 +1.8 282,214 + Echvi_0279 0.11 -0.3 282,219 + Echvi_0279 0.11 -1.0 282,234 + +0.5 282,235 - Echvi_0279 0.12 -0.5 282,256 + Echvi_0279 0.13 +0.1 282,291 + Echvi_0279 0.14 +0.8 282,292 - Echvi_0279 0.14 -0.1 282,304 - Echvi_0279 0.14 +2.0 282,455 - Echvi_0279 0.20 +0.1 282,481 + Echvi_0279 0.21 -0.6 282,496 - Echvi_0279 0.22 -2.7 282,520 - Echvi_0279 0.23 +0.3 282,624 + Echvi_0279 0.26 +1.5 282,624 + Echvi_0279 0.26 -0.9 282,625 - Echvi_0279 0.27 -1.4 282,658 + Echvi_0279 0.28 -1.8 282,658 + Echvi_0279 0.28 +0.6 282,658 + Echvi_0279 0.28 +0.3 282,658 + Echvi_0279 0.28 +2.0 282,701 + Echvi_0279 0.29 +0.5 282,701 + Echvi_0279 0.29 -0.7 282,702 - Echvi_0279 0.29 -0.4 282,703 + Echvi_0279 0.29 -0.2 282,703 + Echvi_0279 0.29 +0.4 282,703 + Echvi_0279 0.29 -0.2 282,703 + Echvi_0279 0.29 -2.1 282,704 - Echvi_0279 0.30 -0.3 282,704 - Echvi_0279 0.30 -0.3 282,704 - Echvi_0279 0.30 +0.3 282,778 - Echvi_0279 0.32 +2.0 282,849 + Echvi_0279 0.35 +0.4 282,855 + Echvi_0279 0.35 +1.3 282,855 + Echvi_0279 0.35 +0.2 282,877 - Echvi_0279 0.36 -0.3 282,887 - Echvi_0279 0.36 -1.1 282,972 - Echvi_0279 0.40 +1.2 282,986 + Echvi_0279 0.40 +0.2 283,045 + Echvi_0279 0.42 -1.4 283,046 - Echvi_0279 0.42 -0.2 283,122 + Echvi_0279 0.45 +1.0 283,136 + Echvi_0279 0.46 -3.1 283,136 + Echvi_0279 0.46 +1.2 283,137 - Echvi_0279 0.46 -0.2 283,290 + Echvi_0279 0.52 +3.5 283,291 - Echvi_0279 0.52 -0.3 283,340 + Echvi_0279 0.54 +0.5 283,341 - Echvi_0279 0.54 +1.0 283,341 - Echvi_0279 0.54 -1.0 283,346 + Echvi_0279 0.54 +0.1 283,427 - Echvi_0279 0.57 +2.1 283,500 - Echvi_0279 0.60 -1.1 283,568 - Echvi_0279 0.62 +0.2 283,578 + Echvi_0279 0.63 +0.3 283,582 + Echvi_0279 0.63 +0.4 283,582 + Echvi_0279 0.63 -2.0 283,582 + Echvi_0279 0.63 -2.8 283,582 + Echvi_0279 0.63 +1.2 283,582 + Echvi_0279 0.63 +0.4 283,582 + Echvi_0279 0.63 -0.9 283,582 + Echvi_0279 0.63 +0.3 283,582 + Echvi_0279 0.63 -0.3 283,582 + Echvi_0279 0.63 +0.1 283,583 - Echvi_0279 0.63 -2.6 283,585 - Echvi_0279 0.63 +0.4 283,595 - Echvi_0279 0.63 -0.1 283,622 - Echvi_0279 0.64 -1.2 283,623 + Echvi_0279 0.64 +0.7 283,624 - Echvi_0279 0.64 +0.1 283,624 - Echvi_0279 0.64 +0.9 283,624 - Echvi_0279 0.64 +1.4 283,668 + Echvi_0279 0.66 +0.3 283,669 - Echvi_0279 0.66 +0.5 283,723 + Echvi_0279 0.68 +0.6 283,724 - Echvi_0279 0.68 +1.6 283,736 + Echvi_0279 0.69 +1.6 283,737 - Echvi_0279 0.69 +0.3 283,737 - Echvi_0279 0.69 -1.4 283,737 - Echvi_0279 0.69 -0.1 283,750 + Echvi_0279 0.69 -0.4 283,750 + Echvi_0279 0.69 +2.1 283,752 + Echvi_0279 0.69 -0.7 283,752 + Echvi_0279 0.69 -0.0 283,752 + Echvi_0279 0.69 +0.3 283,753 - Echvi_0279 0.69 -1.9 283,756 + Echvi_0279 0.69 -1.8 283,756 + Echvi_0279 0.69 -2.5 283,756 + Echvi_0279 0.69 +0.3 283,756 + Echvi_0279 0.69 +0.2 283,756 + Echvi_0279 0.69 -1.2 283,756 + Echvi_0279 0.69 -0.6 283,757 - Echvi_0279 0.69 +1.5 283,757 - Echvi_0279 0.69 +0.8 283,757 - Echvi_0279 0.69 +0.7 283,757 - Echvi_0279 0.69 +3.2 283,757 - Echvi_0279 0.69 -1.2 283,808 - Echvi_0279 0.71 -1.7 283,849 + Echvi_0279 0.73 +0.7 283,850 - Echvi_0279 0.73 -0.5 283,930 + Echvi_0279 0.76 -1.1 283,932 + Echvi_0279 0.76 -0.5 283,932 + Echvi_0279 0.76 +1.0 283,932 + Echvi_0279 0.76 -0.5 283,932 + Echvi_0279 0.76 -1.0 283,954 + Echvi_0279 0.77 +0.2 283,954 + Echvi_0279 0.77 -0.4 283,982 + Echvi_0279 0.78 -1.4 283,983 - Echvi_0279 0.78 +1.2 284,044 - Echvi_0279 0.80 +1.1 284,129 - Echvi_0279 0.83 +2.0 284,253 + Echvi_0279 0.88 +0.8 284,254 - Echvi_0279 0.88 +0.6 284,351 - -1.1 284,355 + +0.6 284,356 - +0.2 284,356 - -2.8 284,356 - +1.0 284,356 - +0.9 284,359 - -0.0 284,423 - -0.9 284,443 - -0.6 284,546 - -0.9 284,567 - -0.8 284,586 - -2.8 284,605 + -0.2 284,620 + +0.3 284,649 + +2.0 284,776 - -1.2 284,776 - +2.1 284,776 - +0.2 284,798 + -0.9 284,959 - -2.0 285,042 - -2.0 285,042 - +0.8 285,042 - +1.2 285,042 - +0.8 285,049 - -0.6 285,049 - +2.0 285,049 - +1.5 285,067 - +0.5 285,067 - +1.5 285,178 + +2.7 285,178 + +0.4 285,281 + -0.0 285,281 + -0.8 285,281 + -1.5 285,281 + +0.7 285,366 + +1.6 285,368 + +0.6 285,368 + +1.1 285,368 + -0.9 285,440 + -0.6 285,440 + -1.4 285,440 + -1.2 285,441 - +0.9 285,451 - +4.0 285,507 + +1.7 285,523 - +0.9 285,525 - -0.7 285,551 + +1.4 285,551 + -0.6 285,551 + +1.6 285,564 + +1.6 285,565 - -0.4
Or see this region's nucleotide sequence