Strain Fitness in Ralstonia solanacearum PSI07 around RPSI07_RS07635

Experiment: M63_quarter_strength

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M63_quarter_strength
2,032,636	+		RPSI07_RS07630	0.32	-1.3
2,032,813	+		RPSI07_RS07630	0.45	-0.6
2,032,813	+		RPSI07_RS07630	0.45	-2.1
2,032,813	+		RPSI07_RS07630	0.45	-0.2
2,032,814	-		RPSI07_RS07630	0.45	-1.2
2,032,858	+		RPSI07_RS07630	0.48	+0.3
2,032,858	+		RPSI07_RS07630	0.48	-1.1
2,032,859	-		RPSI07_RS07630	0.48	-0.3
2,032,859	-		RPSI07_RS07630	0.48	-1.1
2,032,859	-		RPSI07_RS07630	0.48	+1.1
2,032,879	+		RPSI07_RS07630	0.50	+1.0
2,032,879	+		RPSI07_RS07630	0.50	-1.1
2,032,879	+		RPSI07_RS07630	0.50	-1.6
2,032,880	-		RPSI07_RS07630	0.50	+2.0
2,032,880	-		RPSI07_RS07630	0.50	-0.3
2,032,880	-		RPSI07_RS07630	0.50	-1.5
2,032,897	+		RPSI07_RS07630	0.51	+0.3
2,032,897	+		RPSI07_RS07630	0.51	-1.0
2,032,898	-		RPSI07_RS07630	0.51	-0.3
2,032,915	+		RPSI07_RS07630	0.52	-3.4
2,032,915	+		RPSI07_RS07630	0.52	-0.5
2,032,916	-		RPSI07_RS07630	0.52	+0.1
2,032,916	-		RPSI07_RS07630	0.52	-1.3
2,032,916	-		RPSI07_RS07630	0.52	+0.7
2,032,916	-		RPSI07_RS07630	0.52	-3.5
2,032,916	-		RPSI07_RS07630	0.52	+0.0
2,033,038	+		RPSI07_RS07630	0.61	-1.7
2,033,039	-		RPSI07_RS07630	0.61	-0.1
2,033,039	-		RPSI07_RS07630	0.61	-2.8
2,033,039	-		RPSI07_RS07630	0.61	+0.7
2,033,039	-		RPSI07_RS07630	0.61	-1.3
2,033,039	-		RPSI07_RS07630	0.61	-0.7
2,033,056	+		RPSI07_RS07630	0.63	-0.5
2,033,057	-		RPSI07_RS07630	0.63	-1.5
2,033,083	+		RPSI07_RS07630	0.65	+0.8
2,033,084	-		RPSI07_RS07630	0.65	+0.7
2,033,084	-		RPSI07_RS07630	0.65	-4.0
2,033,084	-		RPSI07_RS07630	0.65	-1.1
2,033,150	-		RPSI07_RS07630	0.69	+0.7
2,033,159	-		RPSI07_RS07630	0.70	-2.6
2,033,159	-		RPSI07_RS07630	0.70	-0.3
2,033,284	+		RPSI07_RS07630	0.79	-0.6
2,033,284	+		RPSI07_RS07630	0.79	+0.4
2,033,284	+		RPSI07_RS07630	0.79	+0.9
2,033,284	+		RPSI07_RS07630	0.79	-0.8
2,033,284	+		RPSI07_RS07630	0.79	+0.8
2,033,284	+		RPSI07_RS07630	0.79	+0.7
2,033,285	-		RPSI07_RS07630	0.79	-1.6
2,033,285	-		RPSI07_RS07630	0.79	-0.4
2,033,285	-		RPSI07_RS07630	0.79	-0.3
2,033,285	-		RPSI07_RS07630	0.79	-0.1
2,033,419	+		RPSI07_RS07630	0.89	-3.6
2,033,419	+		RPSI07_RS07630	0.89	-0.4
2,033,420	-		RPSI07_RS07630	0.89	-0.8
2,033,420	-		RPSI07_RS07630	0.89	-1.7
2,033,425	+		RPSI07_RS07630	0.89	+0.9
2,033,425	+		RPSI07_RS07630	0.89	+1.3
2,033,425	+		RPSI07_RS07630	0.89	-0.2
2,033,425	+		RPSI07_RS07630	0.89	+0.9
2,033,426	-		RPSI07_RS07630	0.90	-1.3
2,033,426	-		RPSI07_RS07630	0.90	-2.0
2,033,440	+				+0.7
2,033,440	+				-2.7
2,033,441	-				-0.3
2,033,441	-				-0.3
2,033,441	-				-0.3
2,033,441	-				-1.3
2,033,443	+				-0.4
2,033,443	+				+1.0
2,033,443	+				+1.3
2,033,444	-				-2.8
2,033,444	-				+0.5
2,033,444	-				-2.5
2,033,444	-				-1.9
2,033,444	-				-2.4
2,033,444	-				-1.3
2,033,444	-				+0.7
2,033,444	-				-0.3
2,033,444	-				+2.3
2,033,470	+				-0.3
2,033,470	+				-2.4
2,033,470	+				+0.1
2,033,470	+				+0.7
2,033,471	-				+0.7
2,033,471	-				-0.3
2,033,471	-				+0.3
2,033,471	-				-1.1
2,033,481	+				-0.5
2,033,482	-				+0.7
2,033,491	+				+0.5
2,033,491	+				+2.1
2,033,491	+				-0.0
2,033,491	+				-1.0
2,033,492	-				-1.3
2,033,492	-				-0.3
2,033,492	-				-2.2
2,033,492	-				-0.7
2,033,492	-				-0.9
2,033,492	-				-1.4
2,033,492	-				-2.1
2,033,492	-				+0.4
2,033,492	-				-0.2
2,033,569	+				-1.6
2,033,569	+				-0.9
2,033,569	+				-0.7
2,033,569	+				-0.3
2,033,570	-				-0.9
2,033,570	-				-1.5
2,033,601	+				-0.1
2,033,601	+				-0.8
2,033,602	-				-4.4
2,033,602	-				-0.6
2,033,635	+				-2.3
2,033,778	+		RPSI07_RS07635	0.15	-0.3
2,033,779	-		RPSI07_RS07635	0.15	-1.9
2,033,976	+		RPSI07_RS07635	0.35	-1.3
2,033,976	+		RPSI07_RS07635	0.35	-2.3
2,033,977	-		RPSI07_RS07635	0.35	-0.3
2,034,012	+		RPSI07_RS07635	0.38	-1.2
2,034,012	+		RPSI07_RS07635	0.38	-1.9
2,034,012	+		RPSI07_RS07635	0.38	-0.7
2,034,012	+		RPSI07_RS07635	0.38	-0.3
2,034,013	-		RPSI07_RS07635	0.38	+0.7
2,034,013	-		RPSI07_RS07635	0.38	-2.1
2,034,013	-		RPSI07_RS07635	0.38	-3.1
2,034,013	-		RPSI07_RS07635	0.38	-1.5
2,034,013	-		RPSI07_RS07635	0.38	-0.4
2,034,087	+		RPSI07_RS07635	0.46	-2.1
2,034,087	+		RPSI07_RS07635	0.46	-0.5
2,034,087	+		RPSI07_RS07635	0.46	-1.2
2,034,087	+		RPSI07_RS07635	0.46	+1.0
2,034,087	+		RPSI07_RS07635	0.46	+1.9
2,034,087	+				-0.3
2,034,087	+		RPSI07_RS07635	0.46	+1.4
2,034,087	+		RPSI07_RS07635	0.46	-2.6
2,034,087	+		RPSI07_RS07635	0.46	+1.3
2,034,087	+		RPSI07_RS07635	0.46	-1.7
2,034,087	+		RPSI07_RS07635	0.46	-1.3
2,034,088	-		RPSI07_RS07635	0.46	-2.0
2,034,088	-		RPSI07_RS07635	0.46	-1.6
2,034,088	-		RPSI07_RS07635	0.46	-0.7
2,034,432	+		RPSI07_RS07635	0.79	-1.5
2,034,432	+		RPSI07_RS07635	0.79	-1.0
2,034,433	-		RPSI07_RS07635	0.80	-2.4
2,034,433	-		RPSI07_RS07635	0.80	-2.9
2,034,433	-		RPSI07_RS07635	0.80	-2.8
2,034,612	+				-1.1
2,034,613	-				+0.9
2,034,613	-				-0.9
2,034,630	+				-0.9
2,034,639	+				+1.3
2,034,639	+				+0.3
2,034,667	+				+0.6
2,034,667	+				+0.9
2,034,667	+				-0.8
2,034,668	-				-0.6
2,034,668	-				-0.9
2,034,668	-				-0.3
2,034,674	+				-2.8
2,034,674	+				-1.6
2,034,675	-				+0.3
2,034,845	+		RPSI07_RS07640	0.11	+0.7
2,034,846	-		RPSI07_RS07640	0.11	-0.1
2,034,846	-		RPSI07_RS07640	0.11	+0.4
2,034,846	-		RPSI07_RS07640	0.11	-4.4
2,034,860	+		RPSI07_RS07640	0.12	-1.9
2,034,860	+		RPSI07_RS07640	0.12	-2.0
2,034,861	-		RPSI07_RS07640	0.12	-1.5
2,034,861	-		RPSI07_RS07640	0.12	-1.6
2,034,861	-		RPSI07_RS07640	0.12	-2.3
2,034,861	-		RPSI07_RS07640	0.12	-2.3
2,035,034	+		RPSI07_RS07640	0.23	-0.3
2,035,035	-		RPSI07_RS07640	0.23	+0.5
2,035,118	+		RPSI07_RS07640	0.28	+0.4
2,035,118	+		RPSI07_RS07640	0.28	-1.3
2,035,118	+		RPSI07_RS07640	0.28	-1.2
2,035,280	+		RPSI07_RS07640	0.39	+0.3
2,035,280	+		RPSI07_RS07640	0.39	-1.6
2,035,281	-		RPSI07_RS07640	0.39	+1.0
2,035,281	-		RPSI07_RS07640	0.39	-1.5
2,035,281	-		RPSI07_RS07640	0.39	+0.4