Strain Fitness in Ralstonia solanacearum PSI07 around RPSI07_RS05885

Experiment: M63_quarter_strength

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M63_quarter_strength
1,600,710	+		RPSI07_RS05880	0.59	+1.6
1,600,710	+		RPSI07_RS05880	0.59	+0.2
1,600,710	+		RPSI07_RS05880	0.59	-0.3
1,600,711	-		RPSI07_RS05880	0.59	+0.2
1,601,025	+		RPSI07_RS05880	0.73	+1.2
1,601,025	+		RPSI07_RS05880	0.73	+1.7
1,601,026	-		RPSI07_RS05880	0.73	+0.2
1,601,026	-		RPSI07_RS05880	0.73	+0.5
1,601,026	-		RPSI07_RS05880	0.73	+1.1
1,601,026	-		RPSI07_RS05880	0.73	-0.1
1,601,026	-		RPSI07_RS05880	0.73	+0.1
1,601,026	-		RPSI07_RS05880	0.73	+2.1
1,601,026	-		RPSI07_RS05880	0.73	+0.2
1,601,026	-		RPSI07_RS05880	0.73	-1.0
1,601,026	-		RPSI07_RS05880	0.73	-0.5
1,601,026	-		RPSI07_RS05880	0.73	+0.0
1,601,026	-		RPSI07_RS05880	0.73	+0.4
1,601,109	+		RPSI07_RS05880	0.77	+2.5
1,601,109	+		RPSI07_RS05880	0.77	-0.5
1,601,109	+		RPSI07_RS05880	0.77	-0.3
1,601,109	+		RPSI07_RS05880	0.77	-0.3
1,601,110	-		RPSI07_RS05880	0.77	+0.8
1,601,110	-		RPSI07_RS05880	0.77	+3.6
1,601,110	-		RPSI07_RS05880	0.77	-0.3
1,601,110	-		RPSI07_RS05880	0.77	-0.3
1,601,110	-		RPSI07_RS05880	0.77	-0.9
1,601,202	+		RPSI07_RS05880	0.82	-0.5
1,601,202	+		RPSI07_RS05880	0.82	+0.7
1,601,202	+		RPSI07_RS05880	0.82	-0.4
1,601,203	-		RPSI07_RS05880	0.82	+1.7
1,601,203	-		RPSI07_RS05880	0.82	+1.8
1,601,203	-		RPSI07_RS05880	0.82	-0.8
1,601,203	-		RPSI07_RS05880	0.82	-0.6
1,601,256	+		RPSI07_RS05880	0.84	-0.7
1,601,257	-		RPSI07_RS05880	0.84	-0.3
1,601,343	+		RPSI07_RS05880	0.88	-0.9
1,601,344	-		RPSI07_RS05880	0.88	-1.1
1,601,344	-		RPSI07_RS05880	0.88	-0.7
1,601,400	+				+1.0
1,601,401	-				-0.2
1,601,401	-				+0.1
1,601,401	-				-0.1
1,601,401	-				+0.4
1,601,439	+				+2.2
1,601,440	-				+0.4
1,601,592	+				+1.8
1,601,593	-				-0.3
1,601,841	-				+0.7
1,601,841	-				+1.2
1,601,841	-				+0.7
1,601,841	-				-0.2
1,601,876	+		RPSI07_RS05885	0.11	+0.4
1,601,876	+		RPSI07_RS05885	0.11	-3.0
1,601,876	+		RPSI07_RS05885	0.11	-1.3
1,601,876	+		RPSI07_RS05885	0.11	+0.7
1,601,876	+		RPSI07_RS05885	0.11	+0.0
1,601,877	-		RPSI07_RS05885	0.11	-1.1
1,601,877	-		RPSI07_RS05885	0.11	+0.1
1,601,877	-		RPSI07_RS05885	0.11	+2.6
1,601,877	-		RPSI07_RS05885	0.11	+1.8
1,601,912	+		RPSI07_RS05885	0.13	+3.1
1,601,912	+		RPSI07_RS05885	0.13	+0.7
1,601,913	-		RPSI07_RS05885	0.13	-0.3
1,601,913	-		RPSI07_RS05885	0.13	+0.7
1,601,913	-		RPSI07_RS05885	0.13	+1.0
1,601,913	-		RPSI07_RS05885	0.13	+1.3
1,601,915	+		RPSI07_RS05885	0.14	-1.3
1,601,915	+		RPSI07_RS05885	0.14	+0.7
1,601,915	+		RPSI07_RS05885	0.14	+1.2
1,601,915	+		RPSI07_RS05885	0.14	-0.8
1,601,916	-		RPSI07_RS05885	0.14	-0.3
1,601,916	-		RPSI07_RS05885	0.14	+2.7
1,601,916	-		RPSI07_RS05885	0.14	-0.7
1,601,916	-		RPSI07_RS05885	0.14	-1.4
1,601,916	-		RPSI07_RS05885	0.14	+1.0
1,601,916	-		RPSI07_RS05885	0.14	+0.2
1,602,088	-		RPSI07_RS05885	0.23	-0.8
1,602,088	-		RPSI07_RS05885	0.23	+0.2
1,602,116	+		RPSI07_RS05885	0.25	+0.9
1,602,116	+		RPSI07_RS05885	0.25	+1.3
1,602,116	+		RPSI07_RS05885	0.25	-1.3
1,602,116	+		RPSI07_RS05885	0.25	-2.2
1,602,117	-		RPSI07_RS05885	0.25	+0.6
1,602,117	-		RPSI07_RS05885	0.25	+0.8
1,602,117	-		RPSI07_RS05885	0.25	-0.6
1,602,266	+		RPSI07_RS05885	0.33	+0.7
1,602,266	+		RPSI07_RS05885	0.33	+1.6
1,602,266	+		RPSI07_RS05885	0.33	+2.1
1,602,266	+		RPSI07_RS05885	0.33	+0.2
1,602,266	+		RPSI07_RS05885	0.33	+1.7
1,602,267	-		RPSI07_RS05885	0.33	-2.2
1,602,267	-		RPSI07_RS05885	0.33	+3.2
1,602,359	+		RPSI07_RS05885	0.38	-0.2
1,602,359	+		RPSI07_RS05885	0.38	+1.4
1,602,359	+		RPSI07_RS05885	0.38	-0.7
1,602,359	+		RPSI07_RS05885	0.38	-1.0
1,602,359	+		RPSI07_RS05885	0.38	+0.6
1,602,359	+		RPSI07_RS05885	0.38	+2.5
1,602,359	+		RPSI07_RS05885	0.38	-1.7
1,602,359	+		RPSI07_RS05885	0.38	+0.9
1,602,360	-		RPSI07_RS05885	0.38	+0.5
1,602,384	-		RPSI07_RS05885	0.40	+1.2
1,602,384	-		RPSI07_RS05885	0.40	-1.1
1,602,455	+		RPSI07_RS05885	0.44	+0.4
1,602,455	+		RPSI07_RS05885	0.44	+0.8
1,602,456	-		RPSI07_RS05885	0.44	-1.9
1,602,456	-		RPSI07_RS05885	0.44	+3.4
1,602,456	-		RPSI07_RS05885	0.44	+1.3
1,602,456	-		RPSI07_RS05885	0.44	+1.2
1,602,456	-		RPSI07_RS05885	0.44	+1.2
1,602,456	-		RPSI07_RS05885	0.44	-0.8
1,602,456	-		RPSI07_RS05885	0.44	-0.6
1,602,530	+		RPSI07_RS05885	0.48	+2.2
1,602,530	+		RPSI07_RS05885	0.48	+0.0
1,602,530	+		RPSI07_RS05885	0.48	-1.9
1,602,531	-		RPSI07_RS05885	0.48	+0.5
1,602,531	-		RPSI07_RS05885	0.48	+0.9
1,602,531	-		RPSI07_RS05885	0.48	+1.9
1,602,533	+		RPSI07_RS05885	0.48	+1.5
1,602,534	-		RPSI07_RS05885	0.48	+1.2
1,602,636	-		RPSI07_RS05885	0.54	+0.2
1,602,636	-		RPSI07_RS05885	0.54	+0.7
1,602,647	+		RPSI07_RS05885	0.54	+1.7
1,602,647	+		RPSI07_RS05885	0.54	-0.3
1,602,648	-		RPSI07_RS05885	0.54	+1.5
1,602,962	+		RPSI07_RS05885	0.72	-1.3
1,602,963	-		RPSI07_RS05885	0.72	-0.7
1,602,963	-		RPSI07_RS05885	0.72	+0.9
1,602,963	-		RPSI07_RS05885	0.72	-0.3
1,602,963	-		RPSI07_RS05885	0.72	-0.1
1,603,094	+		RPSI07_RS05885	0.79	-0.2
1,603,094	+		RPSI07_RS05885	0.79	+1.0
1,603,555	+				+0.4
1,603,555	+				-0.3
1,603,634	-				+0.2
1,603,645	+				+0.2
1,603,645	+				-0.1
1,603,645	+				+0.5
1,603,680	-				-0.3
1,603,681	+				+2.1
1,603,681	+				-2.7
1,603,681	+				-1.6
1,603,681	+				-0.3
1,603,681	+				-0.6
1,603,682	-				+2.0
1,603,682	-				+3.7
1,603,682	-				+1.1
1,603,682	-				-2.2
1,603,682	-				+0.7
1,603,682	-				-0.3
1,603,685	+				+0.7
1,603,780	+				-0.3
1,603,780	+				-0.1
1,603,780	+				-0.4
1,603,780	+				-0.6
1,603,780	+				+3.5
1,603,780	+				+2.2
1,603,780	+				+0.7
1,603,780	+				-0.2
1,603,781	-				+0.8
1,603,781	-				-1.1
1,603,781	-				-0.7
1,603,781	-				+1.3
1,603,781	-				-0.2
1,603,781	-				-0.9
1,603,936	+		RPSI07_RS05890	0.14	+0.7
1,603,937	-		RPSI07_RS05890	0.14	+2.2
1,604,025	-		RPSI07_RS05890	0.16	+0.2
1,604,025	-		RPSI07_RS05890	0.16	+0.7
1,604,027	-		RPSI07_RS05890	0.16	+3.8
1,604,027	-		RPSI07_RS05890	0.16	-1.1
1,604,027	-		RPSI07_RS05890	0.16	+1.2
1,604,062	+		RPSI07_RS05890	0.17	-0.1
1,604,062	+		RPSI07_RS05890	0.17	-1.9
1,604,063	-		RPSI07_RS05890	0.17	+2.1
1,604,063	-		RPSI07_RS05890	0.17	-0.5
1,604,072	+		RPSI07_RS05890	0.17	-0.3
1,604,073	-		RPSI07_RS05890	0.17	+0.1
1,604,119	+		RPSI07_RS05890	0.18	+0.5
1,604,119	+		RPSI07_RS05890	0.18	+1.1
1,604,119	+		RPSI07_RS05890	0.18	+0.3
1,604,120	-		RPSI07_RS05890	0.18	+1.2
1,604,120	-		RPSI07_RS05890	0.18	-1.8
1,604,120	-		RPSI07_RS05890	0.18	+1.2
1,604,120	-		RPSI07_RS05890	0.18	-0.5
1,604,120	-		RPSI07_RS05890	0.18	-0.1
1,604,128	+		RPSI07_RS05890	0.18	-1.2
1,604,128	+		RPSI07_RS05890	0.18	-0.3
1,604,128	+		RPSI07_RS05890	0.18	+0.3
1,604,128	+		RPSI07_RS05890	0.18	-0.3
1,604,129	-		RPSI07_RS05890	0.18	+1.4
1,604,129	-		RPSI07_RS05890	0.18	+0.7
1,604,129	-		RPSI07_RS05890	0.18	-0.3
1,604,186	-		RPSI07_RS05890	0.20	-0.4
1,604,263	+		RPSI07_RS05890	0.22	+0.7
1,604,263	+		RPSI07_RS05890	0.22	-0.5
1,604,263	+		RPSI07_RS05890	0.22	+1.8
1,604,264	-		RPSI07_RS05890	0.22	+0.3
1,604,264	-		RPSI07_RS05890	0.22	-0.3