Strain Fitness in Pseudomonas simiae WCS417 around PS417_04880

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,082,365	+				+1.0
1,082,366	-				-1.1
1,082,366	-				-0.3
1,082,699	+		PS417_04875	0.23	-0.1
1,082,699	+		PS417_04875	0.23	-0.4
1,083,071	+				+1.2
1,083,227	-				+0.7
1,083,315	-				+0.0
1,083,562	+		PS417_04880	0.28	-2.7
1,083,655	-		PS417_04880	0.37	+0.9
1,083,655	-				+0.3
1,083,655	-		PS417_04880	0.37	+0.5
1,083,792	-		PS417_04880	0.51	-2.5
1,083,792	-		PS417_04880	0.51	-0.6
1,083,824	+		PS417_04880	0.55	-0.5
1,083,828	+		PS417_04880	0.55	-1.6
1,083,828	+		PS417_04880	0.55	-2.9
1,083,829	-		PS417_04880	0.55	-1.9
1,083,829	-		PS417_04880	0.55	-1.2
1,083,874	+		PS417_04880	0.60	-2.8
1,083,874	+				+1.3
1,083,879	-		PS417_04880	0.60	-0.0
1,083,879	-		PS417_04880	0.60	-2.0
1,083,883	-		PS417_04880	0.61	-1.3
1,083,883	-		PS417_04880	0.61	+0.2
1,083,984	+		PS417_04880	0.71	+0.7
1,083,985	-		PS417_04880	0.71	+0.2
1,083,996	-		PS417_04880	0.72	+0.6
1,084,031	-		PS417_04880	0.76	+0.5
1,084,263	+				+1.6
1,084,318	+				-4.0
1,084,392	-				+0.4
1,084,495	+				+0.1
1,084,496	-				+2.1
1,084,496	-				+0.7
1,084,685	+				+1.0
1,084,685	+				+0.3
1,084,686	-				+0.1
1,084,710	+				-1.1
1,084,711	-				-2.4
1,084,737	-				+1.1
1,084,853	+		PS417_04885	0.11	+1.3
1,084,853	+		PS417_04885	0.11	+2.3
1,084,854	-		PS417_04885	0.11	+2.6
1,084,854	-		PS417_04885	0.11	+0.8
1,084,866	+		PS417_04885	0.11	+0.8
1,084,866	+		PS417_04885	0.11	-0.3
1,084,936	+		PS417_04885	0.13	-1.9
1,084,947	+		PS417_04885	0.13	-0.1
1,084,947	+		PS417_04885	0.13	+0.7
1,084,947	+		PS417_04885	0.13	+0.6
1,084,948	-		PS417_04885	0.13	-0.8
1,084,967	+		PS417_04885	0.14	+0.6
1,084,968	-		PS417_04885	0.14	-0.2
1,084,975	+		PS417_04885	0.14	+0.9
1,084,975	+		PS417_04885	0.14	-2.1
1,084,975	+		PS417_04885	0.14	-1.7
1,084,976	-		PS417_04885	0.14	+0.2
1,085,002	+		PS417_04885	0.14	-0.2
1,085,003	-		PS417_04885	0.14	+3.2
1,085,003	-		PS417_04885	0.14	+1.0
1,085,003	-		PS417_04885	0.14	-1.0
1,085,090	+		PS417_04885	0.16	-2.8
1,085,112	-		PS417_04885	0.17	+0.4
1,085,126	+		PS417_04885	0.17	+0.4
1,085,127	-		PS417_04885	0.17	+1.5
1,085,127	-		PS417_04885	0.17	+1.4
1,085,188	+		PS417_04885	0.18	+1.0
1,085,188	+		PS417_04885	0.18	-1.7
1,085,189	-		PS417_04885	0.18	+0.9
1,085,192	+		PS417_04885	0.18	+0.5
1,085,193	-		PS417_04885	0.18	-1.7
1,085,193	-		PS417_04885	0.18	-1.2
1,085,193	-		PS417_04885	0.18	+0.7
1,085,198	+		PS417_04885	0.18	+0.6
1,085,198	+		PS417_04885	0.18	-0.1
1,085,198	+		PS417_04885	0.18	-0.1