Strain Fitness in Pseudomonas simiae WCS417 around PS417_04785

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
1,059,646	+		PS417_04780	0.62	-1.3
1,059,807	+				-0.4
1,059,856	+				+0.9
1,059,856	+				-2.7
1,059,857	-				+0.4
1,059,857	-				-3.7
1,059,881	-				+0.1
1,059,942	-				+0.6
1,059,942	-				-0.1
1,060,000	+				-1.9
1,060,000	+				+0.1
1,060,000	+				-1.6
1,060,001	-				+0.7
1,060,001	-				-1.6
1,060,001	-				+1.7
1,060,021	+				+0.9
1,060,021	+				+0.2
1,060,022	-				-0.7
1,060,022	-				+0.5
1,060,022	-				-0.3
1,060,022	-				+0.9
1,060,022	-				-3.2
1,060,022	-				-0.3
1,060,125	+				-1.3
1,060,356	+		PS417_04785	0.61	-0.3
1,060,357	-		PS417_04785	0.62	+2.7
1,060,357	-				+1.3
1,060,357	-		PS417_04785	0.62	-2.7
1,060,357	-		PS417_04785	0.62	-0.2
1,060,359	-		PS417_04785	0.62	-0.4
1,060,397	+		PS417_04785	0.74	+0.1
1,060,436	+		PS417_04785	0.85	-2.0
1,060,436	+		PS417_04785	0.85	-2.2
1,060,436	+		PS417_04785	0.85	+1.0
1,060,436	+		PS417_04785	0.85	-1.1
1,060,437	-		PS417_04785	0.86	-2.1
1,060,437	-		PS417_04785	0.86	+0.3
1,060,437	-		PS417_04785	0.86	-0.1
1,060,585	+				+1.3
1,060,629	+				-1.7
1,060,630	-				+0.4
1,060,633	+				+0.0
1,060,668	+				+0.4
1,060,668	+				-2.1
1,060,749	+		PS417_04790	0.12	-0.3
1,060,749	+		PS417_04790	0.12	+1.1
1,060,749	+		PS417_04790	0.12	-1.3
1,060,750	-		PS417_04790	0.12	-0.7
1,060,750	-		PS417_04790	0.12	+0.6
1,060,795	+		PS417_04790	0.15	-1.7
1,061,379	+		PS417_04790	0.55	+1.1
1,061,380	-		PS417_04790	0.56	+0.6
1,061,380	-		PS417_04790	0.56	-0.9
1,061,380	-		PS417_04790	0.56	+0.2
1,061,380	-		PS417_04790	0.56	+0.1
1,061,440	+		PS417_04790	0.60	+0.4
1,061,440	+		PS417_04790	0.60	+0.7
1,061,441	-		PS417_04790	0.60	-0.3
1,061,457	+		PS417_04790	0.61	-1.1