Strain Fitness in Pseudomonas simiae WCS417 around PS417_04595
Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.032 vol% |
---|---|---|---|---|---|
remove | |||||
1,016,876 | + | PS417_04590 | 0.86 | +0.5 | |
1,016,877 | - | PS417_04590 | 0.86 | -0.0 | |
1,016,887 | + | PS417_04590 | 0.87 | +1.9 | |
1,016,887 | + | PS417_04590 | 0.87 | +0.6 | |
1,016,888 | - | PS417_04590 | 0.87 | +0.2 | |
1,016,964 | + | -0.3 | |||
1,016,964 | + | -1.5 | |||
1,016,997 | + | +0.1 | |||
1,016,998 | - | +1.6 | |||
1,017,018 | - | +0.4 | |||
1,017,053 | - | +1.4 | |||
1,017,055 | + | -0.7 | |||
1,017,055 | + | -0.8 | |||
1,017,056 | - | +0.3 | |||
1,017,056 | - | -1.9 | |||
1,017,487 | + | +0.4 | |||
1,017,490 | + | -0.7 | |||
1,017,491 | - | -0.2 | |||
1,017,599 | + | +0.3 | |||
1,017,724 | + | -0.2 | |||
1,017,724 | + | -0.0 | |||
1,017,937 | + | PS417_04595 | 0.29 | -1.2 |
Or see this region's nucleotide sequence