Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04570 and PS417_04575 overlap by 4 nucleotides PS417_04575 and PS417_04580 are separated by 92 nucleotides PS417_04580 and PS417_04585 overlap by 1 nucleotides
PS417_04570: PS417_04570 - phospholipid-binding protein, at 1,012,471 to 1,013,052
_04570
PS417_04575: PS417_04575 - DnaA initiator-associating protein DiaA, at 1,013,049 to 1,013,642
_04575
PS417_04580: PS417_04580 - hypothetical protein, at 1,013,735 to 1,014,106
_04580
PS417_04585: PS417_04585 - hypothetical protein, at 1,014,106 to 1,015,917
_04585
Position (kb)
1013
1014
1015 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 1013.655 kb on - strand at 1013.655 kb on - strand at 1013.655 kb on - strand at 1013.955 kb on - strand, within PS417_04580 at 1013.955 kb on - strand, within PS417_04580 at 1013.955 kb on - strand, within PS417_04580 at 1013.957 kb on + strand, within PS417_04580 at 1013.963 kb on - strand, within PS417_04580 at 1014.001 kb on + strand, within PS417_04580 at 1014.002 kb on - strand, within PS417_04580 at 1014.005 kb on + strand, within PS417_04580 at 1014.890 kb on + strand, within PS417_04585 at 1014.891 kb on - strand, within PS417_04585
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 1,013,655 - -0.6 1,013,655 - +0.1 1,013,655 - +0.5 1,013,955 - PS417_04580 0.59 +1.8 1,013,955 - PS417_04580 0.59 -4.1 1,013,955 - PS417_04580 0.59 +0.6 1,013,957 + PS417_04580 0.60 +4.8 1,013,963 - PS417_04580 0.61 -0.2 1,014,001 + PS417_04580 0.72 +4.6 1,014,002 - PS417_04580 0.72 -2.4 1,014,005 + PS417_04580 0.73 +3.6 1,014,890 + PS417_04585 0.43 -1.9 1,014,891 - PS417_04585 0.43 +1.5
Or see this region's nucleotide sequence