Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03350 and PS417_03355 are separated by 18 nucleotides PS417_03355 and PS417_03360 overlap by 77 nucleotides
PS417_03350: PS417_03350 - cytochrome C peroxidase, at 768,553 to 769,659
_03350
PS417_03355: PS417_03355 - cation transporter, at 769,678 to 772,815
_03355
PS417_03360: PS417_03360 - histidine kinase, at 772,739 to 774,175
_03360
Position (kb) 769
770
771
772
773 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 768.757 kb on - strand, within PS417_03350 at 768.979 kb on + strand, within PS417_03350 at 768.980 kb on - strand, within PS417_03350 at 769.493 kb on + strand, within PS417_03350 at 769.493 kb on + strand, within PS417_03350 at 769.494 kb on - strand, within PS417_03350 at 769.552 kb on + strand at 770.100 kb on - strand, within PS417_03355 at 770.150 kb on - strand, within PS417_03355 at 770.150 kb on - strand, within PS417_03355 at 770.293 kb on + strand, within PS417_03355 at 770.666 kb on - strand, within PS417_03355 at 770.735 kb on + strand, within PS417_03355 at 770.735 kb on + strand, within PS417_03355 at 770.838 kb on + strand, within PS417_03355 at 770.839 kb on - strand, within PS417_03355 at 770.839 kb on - strand, within PS417_03355 at 771.065 kb on - strand, within PS417_03355 at 771.254 kb on - strand, within PS417_03355 at 771.363 kb on + strand, within PS417_03355 at 771.498 kb on - strand, within PS417_03355 at 771.563 kb on - strand, within PS417_03355 at 771.668 kb on - strand, within PS417_03355 at 772.404 kb on - strand, within PS417_03355 at 772.494 kb on + strand, within PS417_03355 at 772.740 kb on + strand at 772.741 kb on - strand at 772.741 kb on - strand at 772.741 kb on - strand at 772.774 kb on + strand at 772.775 kb on - strand at 773.028 kb on + strand, within PS417_03360 at 773.346 kb on + strand, within PS417_03360 at 773.346 kb on + strand, within PS417_03360 at 773.347 kb on - strand, within PS417_03360 at 773.689 kb on - strand, within PS417_03360 at 773.742 kb on - strand, within PS417_03360 at 773.745 kb on + strand, within PS417_03360 at 773.745 kb on + strand, within PS417_03360 at 773.746 kb on - strand, within PS417_03360
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 768,757 - PS417_03350 0.18 -3.9 768,979 + PS417_03350 0.38 -0.6 768,980 - PS417_03350 0.39 -0.8 769,493 + PS417_03350 0.85 -0.5 769,493 + PS417_03350 0.85 +4.1 769,494 - PS417_03350 0.85 +0.9 769,552 + +0.1 770,100 - PS417_03355 0.13 +2.6 770,150 - PS417_03355 0.15 +2.0 770,150 - PS417_03355 0.15 -0.0 770,293 + PS417_03355 0.20 +0.7 770,666 - PS417_03355 0.31 +1.4 770,735 + PS417_03355 0.34 +5.2 770,735 + PS417_03355 0.34 -0.2 770,838 + PS417_03355 0.37 -2.5 770,839 - PS417_03355 0.37 -1.2 770,839 - PS417_03355 0.37 -0.6 771,065 - PS417_03355 0.44 -1.6 771,254 - PS417_03355 0.50 -1.0 771,363 + PS417_03355 0.54 +1.7 771,498 - PS417_03355 0.58 +0.1 771,563 - PS417_03355 0.60 +0.7 771,668 - PS417_03355 0.63 +2.1 772,404 - PS417_03355 0.87 +0.8 772,494 + PS417_03355 0.90 +1.4 772,740 + +0.4 772,741 - +2.3 772,741 - -3.1 772,741 - -1.8 772,774 + -0.6 772,775 - -2.7 773,028 + PS417_03360 0.20 -3.4 773,346 + PS417_03360 0.42 +3.8 773,346 + PS417_03360 0.42 -1.2 773,347 - PS417_03360 0.42 -3.0 773,689 - PS417_03360 0.66 +0.5 773,742 - PS417_03360 0.70 -1.6 773,745 + PS417_03360 0.70 -1.3 773,745 + PS417_03360 0.70 +2.3 773,746 - PS417_03360 0.70 +0.4
Or see this region's nucleotide sequence