Strain Fitness in Pseudomonas simiae WCS417 around PS417_03155
Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.032 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 723,362 | + | PS417_03150 | 0.10 | -1.5 | |
| 723,362 | + | PS417_03150 | 0.10 | +0.9 | |
| 723,362 | + | PS417_03150 | 0.10 | +1.4 | |
| 723,362 | + | PS417_03150 | 0.10 | +0.2 | |
| 723,362 | + | PS417_03150 | 0.10 | +1.1 | |
| 723,363 | - | PS417_03150 | 0.10 | -2.6 | |
| 723,621 | + | PS417_03150 | 0.39 | -1.9 | |
| 723,621 | + | PS417_03150 | 0.39 | -2.1 | |
| 723,685 | - | PS417_03150 | 0.46 | +1.4 | |
| 723,838 | - | PS417_03150 | 0.63 | +1.6 | |
| 723,903 | - | PS417_03150 | 0.71 | +0.5 | |
| 723,966 | - | PS417_03150 | 0.78 | -2.1 | |
| 723,997 | - | PS417_03150 | 0.81 | -1.6 | |
| 723,997 | - | PS417_03150 | 0.81 | +1.4 | |
| 724,294 | + | -1.6 | |||
| 724,566 | - | PS417_03155 | 0.63 | +0.5 | |
| 724,600 | - | PS417_03155 | 0.72 | -1.9 | |
| 724,654 | + | PS417_03155 | 0.85 | +0.9 | |
| 724,654 | + | PS417_03155 | 0.85 | +1.6 | |
| 724,860 | + | -0.4 | |||
| 724,860 | + | +0.5 | |||
| 724,899 | + | +0.8 | |||
| 724,900 | - | -0.9 |
Or see this region's nucleotide sequence