Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02950 and PS417_02955 are separated by 185 nucleotides PS417_02955 and PS417_02960 are separated by 30 nucleotides
PS417_02950: PS417_02950 - tRNA-dihydrouridine synthase B, at 674,263 to 675,276
_02950
PS417_02955: PS417_02955 - hypothetical protein, at 675,462 to 676,676
_02955
PS417_02960: PS417_02960 - ribosomal protein L11 methyltransferase, at 676,707 to 677,585
_02960
Position (kb) 675
676
677 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 675.161 kb on - strand, within PS417_02950 at 675.185 kb on - strand at 675.245 kb on - strand at 675.250 kb on - strand at 675.250 kb on - strand at 675.250 kb on - strand at 675.250 kb on - strand at 675.250 kb on - strand at 675.250 kb on - strand at 675.250 kb on - strand at 675.277 kb on - strand at 675.277 kb on - strand at 675.307 kb on - strand at 675.491 kb on - strand at 675.503 kb on + strand at 675.533 kb on + strand at 675.534 kb on - strand at 675.691 kb on + strand, within PS417_02955 at 675.691 kb on + strand, within PS417_02955 at 675.691 kb on + strand, within PS417_02955 at 675.692 kb on - strand, within PS417_02955 at 675.692 kb on - strand, within PS417_02955 at 675.877 kb on + strand, within PS417_02955 at 675.878 kb on - strand, within PS417_02955 at 676.708 kb on + strand at 676.911 kb on + strand, within PS417_02960 at 676.912 kb on - strand, within PS417_02960 at 676.948 kb on + strand, within PS417_02960 at 676.949 kb on - strand, within PS417_02960 at 677.534 kb on - strand at 677.534 kb on - strand at 677.534 kb on - strand at 677.534 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 675,161 - PS417_02950 0.89 -0.4 675,185 - -2.2 675,245 - -0.2 675,250 - -0.7 675,250 - -0.7 675,250 - -0.2 675,250 - +3.0 675,250 - +0.4 675,250 - -1.6 675,250 - +0.2 675,277 - -0.2 675,277 - +0.8 675,307 - +0.0 675,491 - -2.0 675,503 + +2.8 675,533 + +1.6 675,534 - +1.8 675,691 + PS417_02955 0.19 +2.2 675,691 + PS417_02955 0.19 +1.8 675,691 + PS417_02955 0.19 +0.7 675,692 - PS417_02955 0.19 -2.5 675,692 - PS417_02955 0.19 +1.8 675,877 + PS417_02955 0.34 +1.2 675,878 - PS417_02955 0.34 -0.1 676,708 + -2.1 676,911 + PS417_02960 0.23 -0.2 676,912 - PS417_02960 0.23 -0.5 676,948 + PS417_02960 0.27 -0.2 676,949 - PS417_02960 0.28 +0.3 677,534 - +1.3 677,534 - -1.0 677,534 - +0.2 677,534 - +1.4
Or see this region's nucleotide sequence