Strain Fitness in Pseudomonas simiae WCS417 around PS417_27690
Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.032 vol% |
---|---|---|---|---|---|
remove | |||||
5,972,722 | + | -0.5 | |||
5,972,723 | - | +0.8 | |||
5,972,993 | + | -0.3 | |||
5,973,467 | - | +1.2 | |||
5,973,541 | + | +0.5 | |||
5,973,541 | + | -0.6 | |||
5,973,546 | - | +0.2 | |||
5,973,616 | - | -1.5 | |||
5,973,706 | - | PS417_27690 | 0.17 | -0.3 | |
5,973,706 | - | PS417_27690 | 0.17 | +0.5 | |
5,973,914 | - | PS417_27690 | 0.55 | +2.9 | |
5,973,914 | - | PS417_27690 | 0.55 | +1.5 | |
5,973,936 | + | PS417_27690 | 0.59 | -0.8 | |
5,973,936 | + | PS417_27690 | 0.59 | -2.1 | |
5,973,997 | + | PS417_27690 | 0.70 | +1.8 | |
5,973,997 | + | PS417_27690 | 0.70 | +0.1 | |
5,973,998 | - | PS417_27690 | 0.70 | +0.9 | |
5,974,130 | - | +1.1 | |||
5,974,195 | + | -0.1 | |||
5,974,196 | - | +1.0 | |||
5,974,232 | - | -1.9 | |||
5,974,232 | - | +0.5 | |||
5,974,247 | - | -0.3 | |||
5,974,292 | + | +0.2 | |||
5,974,293 | - | -3.9 |
Or see this region's nucleotide sequence