Strain Fitness in Pseudomonas simiae WCS417 around PS417_27545

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,942,809	-		PS417_27540	0.82	+1.2
5,943,131	-				+0.8
5,943,131	-				+0.3
5,943,131	-				+0.9
5,943,131	-				-3.1
5,943,388	+				-0.1
5,943,388	+		PS417_27545	0.27	-2.9
5,943,388	+		PS417_27545	0.27	+1.0
5,943,388	+		PS417_27545	0.27	+0.3
5,943,389	-		PS417_27545	0.28	+0.9
5,943,389	-		PS417_27545	0.28	+2.6
5,943,398	-		PS417_27545	0.29	+0.6
5,943,433	+		PS417_27545	0.34	+0.2
5,943,434	-		PS417_27545	0.34	+0.2
5,943,434	-		PS417_27545	0.34	-2.5
5,943,434	-		PS417_27545	0.34	+2.3
5,943,434	-		PS417_27545	0.34	-0.2
5,943,571	+		PS417_27545	0.55	+1.5
5,943,572	-		PS417_27545	0.55	-1.3
5,943,572	-		PS417_27545	0.55	+0.6
5,943,572	-		PS417_27545	0.55	-0.5
5,943,693	-		PS417_27545	0.74	+0.3
5,943,829	+				+0.1
5,943,830	-				-0.2
5,943,830	-				+0.7
5,943,832	+				-1.9
5,943,833	-				-0.2
5,943,833	-				+0.8
5,943,833	-				-0.9
5,943,837	-				-1.4
5,943,837	-				-0.8
5,943,909	-				-2.9
5,943,910	+				+2.3
5,943,910	+				-2.6
5,943,910	+				-1.0
5,943,911	-				-0.5
5,943,911	-				-2.3
5,943,911	-				-2.2
5,944,274	+				-3.1
5,944,346	+				+1.1
5,944,355	-				-0.1
5,944,372	+				-0.8
5,944,372	+				-2.9
5,944,372	+				-0.2
5,944,372	+				+1.4
5,944,373	-				+1.5
5,944,373	-				-1.3
5,944,373	-				-1.3
5,944,373	-				-0.9
5,944,379	+				+2.3
5,944,379	+				+0.5
5,944,379	+				+1.2
5,944,379	+				+0.1
5,944,380	-				+0.8
5,944,380	-				+0.1
5,944,416	+		PS417_27555	0.17	-1.5
5,944,416	+		PS417_27555	0.17	-1.8
5,944,416	+		PS417_27555	0.17	-1.1
5,944,417	-		PS417_27555	0.17	-1.5
5,944,417	-		PS417_27555	0.17	-0.6
5,944,417	-		PS417_27555	0.17	+0.2
5,944,731	-				-2.7