Strain Fitness in Pseudomonas simiae WCS417 around PS417_27170

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,864,617	-		PS417_27165	0.41	+1.5
5,864,802	-		PS417_27165	0.57	-0.1
5,864,843	+		PS417_27165	0.61	+1.5
5,864,844	-		PS417_27165	0.61	+1.5
5,864,976	+		PS417_27165	0.72	+0.5
5,865,242	+				+0.2
5,865,399	+				-1.1
5,865,399	+				+3.1
5,865,400	-				-0.8
5,865,640	-		PS417_27170	0.33	+0.2
5,865,640	-		PS417_27170	0.33	-0.3
5,865,839	+		PS417_27170	0.54	-2.4
5,865,840	-		PS417_27170	0.54	+0.9
5,865,849	+				-0.1
5,865,850	-		PS417_27170	0.55	-0.7
5,866,170	+		PS417_27170	0.88	+0.8
5,866,301	+				-1.5
5,866,302	-				-2.4
5,866,350	+				-0.8
5,866,350	+				-1.6
5,866,350	+				-0.3
5,866,350	+				+0.4
5,866,378	-				+0.2
5,866,394	+				+1.5
5,866,394	+				+1.0
5,866,475	+		PS417_27175	0.14	+0.3
5,866,579	-		PS417_27175	0.31	-0.3
5,866,579	-		PS417_27175	0.31	+1.0
5,866,579	-		PS417_27175	0.31	+2.6
5,866,631	+		PS417_27175	0.40	+1.9
5,866,632	-		PS417_27175	0.40	-3.7
5,866,757	+		PS417_27175	0.61	-1.7
5,866,871	-		PS417_27175	0.80	-0.0
5,866,877	+		PS417_27175	0.81	-3.2
5,867,055	-				-0.1
5,867,199	+				-4.5
5,867,199	+				-1.6
5,867,240	+				+1.2