Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26970 and PS417_26975 are separated by 78 nucleotides PS417_26975 and PS417_26980 are separated by 120 nucleotides PS417_26980 and PS417_26985 are separated by 104 nucleotides
PS417_26970: PS417_26970 - prolipoprotein diacylglyceryl transferase, at 5,825,179 to 5,825,991
_26970
PS417_26975: PS417_26975 - membrane protein, at 5,826,070 to 5,826,852
_26975
PS417_26980: PS417_26980 - hypothetical protein, at 5,826,973 to 5,827,719
_26980
PS417_26985: PS417_26985 - phosphoenolpyruvate-protein phosphotransferase, at 5,827,824 to 5,830,103
_26985
Position (kb) 5826
5827
5828 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 5826.006 kb on - strand at 5826.006 kb on - strand at 5826.006 kb on - strand at 5826.048 kb on - strand at 5826.059 kb on - strand at 5826.215 kb on + strand, within PS417_26975 at 5826.215 kb on + strand, within PS417_26975 at 5826.216 kb on - strand, within PS417_26975 at 5826.226 kb on + strand, within PS417_26975 at 5826.226 kb on + strand, within PS417_26975 at 5826.231 kb on + strand, within PS417_26975 at 5826.232 kb on - strand, within PS417_26975 at 5826.232 kb on - strand, within PS417_26975 at 5826.232 kb on - strand, within PS417_26975 at 5826.277 kb on + strand, within PS417_26975 at 5826.278 kb on - strand, within PS417_26975 at 5826.656 kb on - strand, within PS417_26975 at 5826.672 kb on + strand, within PS417_26975 at 5826.808 kb on + strand at 5826.836 kb on + strand at 5826.836 kb on + strand at 5826.837 kb on - strand at 5826.941 kb on - strand at 5827.048 kb on + strand, within PS417_26980 at 5827.100 kb on - strand, within PS417_26980 at 5827.265 kb on - strand, within PS417_26980 at 5827.297 kb on + strand, within PS417_26980 at 5827.345 kb on + strand, within PS417_26980 at 5827.345 kb on + strand, within PS417_26980 at 5827.345 kb on + strand at 5827.345 kb on + strand, within PS417_26980 at 5827.346 kb on - strand, within PS417_26980 at 5827.346 kb on - strand, within PS417_26980 at 5827.703 kb on + strand at 5827.704 kb on - strand at 5827.717 kb on + strand at 5827.736 kb on + strand at 5827.736 kb on + strand at 5828.164 kb on + strand, within PS417_26985 at 5828.323 kb on - strand, within PS417_26985 at 5828.470 kb on - strand, within PS417_26985 at 5828.591 kb on + strand, within PS417_26985 at 5828.591 kb on + strand, within PS417_26985
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 5,826,006 - -1.2 5,826,006 - -2.3 5,826,006 - -1.0 5,826,048 - -1.3 5,826,059 - +1.1 5,826,215 + PS417_26975 0.19 -0.3 5,826,215 + PS417_26975 0.19 +5.5 5,826,216 - PS417_26975 0.19 +0.7 5,826,226 + PS417_26975 0.20 -0.0 5,826,226 + PS417_26975 0.20 -2.6 5,826,231 + PS417_26975 0.21 +0.3 5,826,232 - PS417_26975 0.21 -3.9 5,826,232 - PS417_26975 0.21 -1.9 5,826,232 - PS417_26975 0.21 -0.5 5,826,277 + PS417_26975 0.26 -0.2 5,826,278 - PS417_26975 0.27 -0.2 5,826,656 - PS417_26975 0.75 -0.6 5,826,672 + PS417_26975 0.77 -1.0 5,826,808 + -0.5 5,826,836 + -0.3 5,826,836 + -0.2 5,826,837 - +0.9 5,826,941 - +0.4 5,827,048 + PS417_26980 0.10 -1.4 5,827,100 - PS417_26980 0.17 -0.1 5,827,265 - PS417_26980 0.39 +0.2 5,827,297 + PS417_26980 0.43 -1.9 5,827,345 + PS417_26980 0.50 +0.1 5,827,345 + PS417_26980 0.50 -1.3 5,827,345 + +1.5 5,827,345 + PS417_26980 0.50 -0.9 5,827,346 - PS417_26980 0.50 -0.8 5,827,346 - PS417_26980 0.50 -1.4 5,827,703 + -1.4 5,827,704 - -3.6 5,827,717 + -1.6 5,827,736 + +0.3 5,827,736 + -1.6 5,828,164 + PS417_26985 0.15 +2.4 5,828,323 - PS417_26985 0.22 -4.0 5,828,470 - PS417_26985 0.28 -4.0 5,828,591 + PS417_26985 0.34 -5.1 5,828,591 + PS417_26985 0.34 -3.0
Or see this region's nucleotide sequence