Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26820 and PS417_26825 overlap by 1 nucleotides PS417_26825 and PS417_26830 are separated by 71 nucleotides
PS417_26820: PS417_26820 - peptidase M16, at 5,791,437 to 5,792,927
_26820
PS417_26825: PS417_26825 - 16S rRNA methyltransferase, at 5,792,927 to 5,793,535
_26825
PS417_26830: PS417_26830 - alpha/beta hydrolase, at 5,793,607 to 5,794,602
_26830
Position (kb) 5792
5793
5794 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5791.929 kb on - strand, within PS417_26820 at 5792.167 kb on - strand, within PS417_26820 at 5792.258 kb on + strand, within PS417_26820 at 5792.388 kb on + strand, within PS417_26820 at 5792.389 kb on - strand, within PS417_26820 at 5792.389 kb on - strand, within PS417_26820 at 5792.481 kb on + strand, within PS417_26820 at 5792.482 kb on - strand, within PS417_26820 at 5792.490 kb on + strand, within PS417_26820 at 5792.601 kb on + strand at 5792.724 kb on + strand, within PS417_26820 at 5792.724 kb on + strand, within PS417_26820 at 5792.724 kb on + strand, within PS417_26820 at 5792.782 kb on + strand at 5792.926 kb on - strand at 5793.419 kb on + strand, within PS417_26825 at 5793.503 kb on + strand at 5793.507 kb on - strand at 5793.595 kb on - strand at 5793.622 kb on - strand at 5793.696 kb on + strand at 5793.696 kb on + strand at 5793.835 kb on + strand, within PS417_26830 at 5793.937 kb on + strand, within PS417_26830 at 5793.938 kb on - strand, within PS417_26830 at 5793.938 kb on - strand, within PS417_26830 at 5794.012 kb on + strand, within PS417_26830 at 5794.012 kb on + strand, within PS417_26830 at 5794.012 kb on + strand, within PS417_26830 at 5794.013 kb on - strand, within PS417_26830 at 5794.013 kb on - strand, within PS417_26830 at 5794.165 kb on + strand, within PS417_26830 at 5794.198 kb on + strand, within PS417_26830 at 5794.199 kb on - strand, within PS417_26830 at 5794.354 kb on + strand, within PS417_26830 at 5794.357 kb on + strand, within PS417_26830 at 5794.381 kb on + strand, within PS417_26830 at 5794.455 kb on - strand, within PS417_26830
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 5,791,929 - PS417_26820 0.33 +1.0 5,792,167 - PS417_26820 0.49 +1.8 5,792,258 + PS417_26820 0.55 -0.2 5,792,388 + PS417_26820 0.64 +0.4 5,792,389 - PS417_26820 0.64 +0.1 5,792,389 - PS417_26820 0.64 -0.4 5,792,481 + PS417_26820 0.70 +0.1 5,792,482 - PS417_26820 0.70 -0.9 5,792,490 + PS417_26820 0.71 +0.1 5,792,601 + -0.9 5,792,724 + PS417_26820 0.86 -3.3 5,792,724 + PS417_26820 0.86 -0.4 5,792,724 + PS417_26820 0.86 -2.1 5,792,782 + +0.7 5,792,926 - +2.9 5,793,419 + PS417_26825 0.81 +1.8 5,793,503 + +1.4 5,793,507 - +2.4 5,793,595 - +0.4 5,793,622 - -0.7 5,793,696 + +1.3 5,793,696 + +0.2 5,793,835 + PS417_26830 0.23 +0.7 5,793,937 + PS417_26830 0.33 -1.2 5,793,938 - PS417_26830 0.33 -1.6 5,793,938 - PS417_26830 0.33 +1.0 5,794,012 + PS417_26830 0.41 -1.6 5,794,012 + PS417_26830 0.41 +1.7 5,794,012 + PS417_26830 0.41 -2.7 5,794,013 - PS417_26830 0.41 -2.2 5,794,013 - PS417_26830 0.41 +1.0 5,794,165 + PS417_26830 0.56 -0.4 5,794,198 + PS417_26830 0.59 -0.8 5,794,199 - PS417_26830 0.59 -3.9 5,794,354 + PS417_26830 0.75 +0.2 5,794,357 + PS417_26830 0.75 -1.4 5,794,381 + PS417_26830 0.78 -0.2 5,794,455 - PS417_26830 0.85 -1.2
Or see this region's nucleotide sequence