Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02635 and PS417_02640 are separated by 207 nucleotides PS417_02640 and PS417_02645 are separated by 154 nucleotides
PS417_02635: PS417_02635 - nicotinate phosphoribosyltransferase, at 602,109 to 603,323
_02635
PS417_02640: PS417_02640 - LysR family transcriptional regulator, at 603,531 to 604,421
_02640
PS417_02645: PS417_02645 - aldehyde dehydrogenase, at 604,576 to 606,066
_02645
Position (kb) 603
604
605 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 602.746 kb on - strand, within PS417_02635 at 602.746 kb on - strand, within PS417_02635 at 602.866 kb on + strand, within PS417_02635 at 602.997 kb on + strand, within PS417_02635 at 602.998 kb on - strand, within PS417_02635 at 602.998 kb on - strand, within PS417_02635 at 603.028 kb on + strand, within PS417_02635 at 603.170 kb on - strand, within PS417_02635 at 603.170 kb on - strand, within PS417_02635 at 603.266 kb on - strand at 603.365 kb on + strand at 603.375 kb on + strand at 603.375 kb on + strand at 603.376 kb on - strand at 603.398 kb on + strand at 603.399 kb on - strand at 603.610 kb on + strand at 603.610 kb on + strand at 603.611 kb on - strand at 603.613 kb on + strand at 603.741 kb on - strand, within PS417_02640 at 603.741 kb on - strand, within PS417_02640 at 603.742 kb on + strand, within PS417_02640 at 603.742 kb on + strand, within PS417_02640 at 603.742 kb on + strand, within PS417_02640 at 603.742 kb on + strand, within PS417_02640 at 603.743 kb on - strand, within PS417_02640 at 603.770 kb on - strand, within PS417_02640 at 603.788 kb on - strand, within PS417_02640 at 603.976 kb on + strand, within PS417_02640 at 603.976 kb on + strand, within PS417_02640 at 603.977 kb on - strand, within PS417_02640 at 604.109 kb on - strand, within PS417_02640 at 604.159 kb on + strand, within PS417_02640 at 604.166 kb on + strand, within PS417_02640 at 604.512 kb on - strand at 604.810 kb on + strand, within PS417_02645 at 604.811 kb on - strand, within PS417_02645 at 604.934 kb on - strand, within PS417_02645 at 604.971 kb on + strand, within PS417_02645 at 604.971 kb on + strand, within PS417_02645 at 604.971 kb on + strand, within PS417_02645 at 604.972 kb on - strand, within PS417_02645 at 604.972 kb on - strand, within PS417_02645 at 605.180 kb on - strand, within PS417_02645 at 605.180 kb on - strand, within PS417_02645
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 602,746 - PS417_02635 0.52 -0.5 602,746 - PS417_02635 0.52 +0.0 602,866 + PS417_02635 0.62 +0.8 602,997 + PS417_02635 0.73 +0.6 602,998 - PS417_02635 0.73 -3.2 602,998 - PS417_02635 0.73 -0.2 603,028 + PS417_02635 0.76 -0.7 603,170 - PS417_02635 0.87 -1.9 603,170 - PS417_02635 0.87 +0.3 603,266 - +0.5 603,365 + -0.7 603,375 + -1.9 603,375 + -2.4 603,376 - +0.6 603,398 + -1.7 603,399 - -1.1 603,610 + -0.9 603,610 + -3.1 603,611 - +0.5 603,613 + +1.6 603,741 - PS417_02640 0.24 -0.9 603,741 - PS417_02640 0.24 +1.1 603,742 + PS417_02640 0.24 -0.6 603,742 + PS417_02640 0.24 +1.3 603,742 + PS417_02640 0.24 -0.9 603,742 + PS417_02640 0.24 +1.5 603,743 - PS417_02640 0.24 -1.4 603,770 - PS417_02640 0.27 +1.3 603,788 - PS417_02640 0.29 +2.6 603,976 + PS417_02640 0.50 -1.7 603,976 + PS417_02640 0.50 -3.2 603,977 - PS417_02640 0.50 +0.9 604,109 - PS417_02640 0.65 +1.6 604,159 + PS417_02640 0.70 -1.5 604,166 + PS417_02640 0.71 +0.7 604,512 - -0.3 604,810 + PS417_02645 0.16 +4.2 604,811 - PS417_02645 0.16 -1.7 604,934 - PS417_02645 0.24 +1.1 604,971 + PS417_02645 0.26 -0.3 604,971 + PS417_02645 0.26 +1.2 604,971 + PS417_02645 0.26 -0.6 604,972 - PS417_02645 0.27 -0.3 604,972 - PS417_02645 0.27 +0.8 605,180 - PS417_02645 0.41 +0.1 605,180 - PS417_02645 0.41 -0.2
Or see this region's nucleotide sequence