Strain Fitness in Pseudomonas simiae WCS417 around PS417_26315

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,686,377	-		PS417_26310	0.69	-1.9
5,686,379	+		PS417_26310	0.69	-1.4
5,686,379	+		PS417_26310	0.69	+0.5
5,686,379	+		PS417_26310	0.69	+0.0
5,686,380	-		PS417_26310	0.69	+2.1
5,686,380	-		PS417_26310	0.69	-2.3
5,686,483	+		PS417_26310	0.76	-3.3
5,686,521	+		PS417_26310	0.79	-3.8
5,686,521	+		PS417_26310	0.79	-1.5
5,686,521	+		PS417_26310	0.79	-0.1
5,686,758	+				-1.7
5,686,759	-				-1.7
5,686,975	-				-1.6
5,687,061	-				-2.3
5,687,082	-				-3.1
5,687,082	-				-1.3
5,687,103	-				+4.0
5,687,174	+				-1.8
5,687,174	+				-2.1
5,687,175	-				+1.6
5,687,176	+				-1.9
5,687,177	-				-0.1
5,687,387	+		PS417_26315	0.17	-0.1
5,687,507	+		PS417_26315	0.30	-1.5
5,687,562	-		PS417_26315	0.36	-0.9
5,687,654	+		PS417_26315	0.46	+0.1
5,687,654	+		PS417_26315	0.46	-0.9
5,687,918	+		PS417_26315	0.73	-2.0
5,687,918	+		PS417_26315	0.73	-0.7
5,687,939	+		PS417_26315	0.76	-1.2
5,688,120	+				+0.2
5,688,120	+				-1.7
5,688,120	+				+3.4
5,688,121	-				+3.5
5,688,121	-				-3.8
5,688,121	-				+0.4
5,688,121	-				+0.6
5,688,167	+				-2.4
5,688,234	+				-3.4
5,688,234	+				-2.0
5,688,235	-				+3.5
5,688,235	-				+0.2
5,688,264	-				+0.5
5,688,271	+				-0.7
5,688,271	+				+0.2
5,688,272	-				-0.3
5,688,272	-				-0.1
5,688,272	-				-0.2
5,688,316	+				+0.6
5,688,316	+				-1.6
5,688,317	-				+0.2
5,688,317	-				+0.2
5,688,439	-		PS417_26320	0.24	-1.2
5,688,439	-		PS417_26320	0.24	-1.2
5,688,439	-		PS417_26320	0.24	-1.6
5,688,604	+		PS417_26320	0.43	+0.7
5,688,604	+		PS417_26320	0.43	+1.7
5,688,605	-		PS417_26320	0.43	-0.2
5,688,715	-		PS417_26320	0.56	-2.7
5,688,755	-		PS417_26320	0.61	+0.5
5,689,063	-				-1.6
5,689,063	-				+0.8
5,689,068	-				+1.5
5,689,068	-				+0.2