Strain Fitness in Pseudomonas simiae WCS417 around PS417_25940

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,602,352	+				+0.4
5,602,352	+				-0.8
5,602,353	-				+0.0
5,602,353	-				+0.5
5,602,353	-				+0.4
5,602,357	+				-3.0
5,602,358	-				-3.6
5,602,385	+		PS417_25930	0.13	+1.2
5,602,385	+		PS417_25930	0.13	+0.4
5,602,386	-		PS417_25930	0.13	-1.2
5,602,386	-		PS417_25930	0.13	-1.9
5,602,386	-		PS417_25930	0.13	+2.1
5,602,439	+		PS417_25930	0.20	-1.7
5,602,440	-		PS417_25930	0.20	-2.1
5,602,443	-		PS417_25930	0.20	+1.5
5,602,668	-		PS417_25930	0.50	+1.6
5,602,808	+		PS417_25930	0.69	+0.5
5,602,808	+		PS417_25930	0.69	+0.7
5,602,808	+		PS417_25930	0.69	-0.0
5,602,809	-		PS417_25930	0.69	+0.1
5,602,809	-		PS417_25930	0.69	-0.7
5,602,877	+		PS417_25930	0.78	+0.1
5,602,877	+		PS417_25930	0.78	+0.2
5,602,878	-		PS417_25930	0.78	-1.8
5,602,991	+				+1.3
5,603,024	-				+0.0
5,603,037	+				-0.9
5,603,038	-				+0.9
5,603,361	-				-1.6
5,603,564	+		PS417_25940	0.24	-0.5
5,603,564	+		PS417_25940	0.24	+1.1
5,603,564	+		PS417_25940	0.24	-0.9
5,603,565	-		PS417_25940	0.24	-0.9
5,603,565	-		PS417_25940	0.24	-1.2
5,603,565	-		PS417_25940	0.24	-2.7
5,603,565	-		PS417_25940	0.24	-1.4
5,603,565	-		PS417_25940	0.24	-3.9
5,603,566	+		PS417_25940	0.24	-0.0
5,603,871	-		PS417_25940	0.51	-0.4
5,604,014	+		PS417_25940	0.63	+2.0
5,604,014	+		PS417_25940	0.63	-0.8
5,604,164	+		PS417_25940	0.76	-2.5
5,604,461	+				+0.6
5,604,461	+				-2.5
5,604,462	-				+0.9
5,604,488	+				-0.7
5,604,488	+				-0.2
5,604,586	-				-1.4
5,604,636	+				+0.5
5,604,636	+				-1.6
5,604,636	+				-2.1
5,604,637	-				+1.0
5,604,637	-				+1.8
5,604,742	+				+0.8
5,604,742	+				-2.7
5,604,946	+		PS417_25950	0.14	+0.5
5,605,059	-		PS417_25950	0.23	-0.6
5,605,086	+		PS417_25950	0.25	-2.2
5,605,158	+		PS417_25950	0.31	-0.7
5,605,194	+		PS417_25950	0.34	-1.2
5,605,208	-		PS417_25950	0.35	-0.8
5,605,274	+		PS417_25950	0.40	+0.2
5,605,382	+		PS417_25950	0.49	+0.3