Strain Fitness in Pseudomonas simiae WCS417 around PS417_24560

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,328,602	+				+0.4
5,328,719	+				+2.1
5,328,761	+				+1.3
5,328,782	+				-0.6
5,328,782	+				+0.3
5,328,783	-				+1.0
5,328,790	+				-0.8
5,328,791	-				+1.1
5,328,791	-				+2.7
5,328,791	-				-2.1
5,328,791	-				+0.1
5,328,792	+				+1.5
5,328,792	+				-2.2
5,328,792	+				-2.4
5,328,793	-				+0.3
5,328,793	-				+4.8
5,328,793	-				-1.4
5,328,793	-				-2.3
5,328,793	-				+2.3
5,328,793	-				-2.8
5,328,793	-				-1.2
5,328,793	-				+3.3
5,328,793	-				-1.4
5,328,825	-				+0.5
5,328,984	+		PS417_24555	0.38	-1.4
5,328,984	+		PS417_24555	0.38	-0.4
5,328,985	-		PS417_24555	0.38	-1.1
5,328,985	-		PS417_24555	0.38	-1.5
5,329,035	-		PS417_24555	0.50	+1.5
5,329,038	+		PS417_24555	0.51	-0.3
5,329,039	-		PS417_24555	0.51	+0.4
5,329,260	-				-0.4
5,329,532	+		PS417_24560	0.30	-0.1
5,329,651	+		PS417_24560	0.44	+1.4
5,329,657	+		PS417_24560	0.44	+1.7
5,329,726	-		PS417_24560	0.52	-1.2
5,329,831	-		PS417_24560	0.64	+1.5
5,329,831	-		PS417_24560	0.64	+2.7
5,329,831	-		PS417_24560	0.64	+2.1
5,330,105	-				-0.6
5,330,151	+				-3.0
5,330,152	-				+0.8
5,330,154	+				-1.0
5,330,155	-				+1.0
5,330,235	+				-0.7
5,330,306	+		PS417_24565	0.15	-2.5
5,330,352	+				-0.2
5,330,415	+		PS417_24565	0.25	+0.1
5,330,415	+		PS417_24565	0.25	-0.0
5,330,415	+		PS417_24565	0.25	-0.2
5,330,416	-		PS417_24565	0.25	-1.6
5,330,416	-		PS417_24565	0.25	+0.1
5,330,416	-		PS417_24565	0.25	-0.2
5,330,416	-		PS417_24565	0.25	+0.4
5,330,436	+		PS417_24565	0.27	-0.0
5,330,436	+		PS417_24565	0.27	+0.6
5,330,436	+		PS417_24565	0.27	-4.5
5,330,442	+		PS417_24565	0.28	+0.4
5,330,442	+		PS417_24565	0.28	+0.3
5,330,442	-		PS417_24565	0.28	+0.6
5,330,443	-		PS417_24565	0.28	-1.0
5,330,445	+		PS417_24565	0.28	+0.4
5,330,446	-		PS417_24565	0.28	+0.5
5,330,511	+		PS417_24565	0.34	-0.9
5,330,511	+		PS417_24565	0.34	-3.5
5,330,550	+		PS417_24565	0.38	-4.3
5,330,551	-		PS417_24565	0.38	-2.3
5,330,551	-		PS417_24565	0.38	+0.8
5,330,551	-		PS417_24565	0.38	-3.4
5,330,595	+		PS417_24565	0.43	+0.1
5,330,596	-		PS417_24565	0.43	+1.0
5,330,596	-		PS417_24565	0.43	+0.1
5,330,799	+		PS417_24565	0.62	+0.1
5,330,800	-		PS417_24565	0.62	+1.1
5,330,902	+		PS417_24565	0.72	-2.0
5,330,903	-		PS417_24565	0.72	-3.9