Strain Fitness in Pseudomonas simiae WCS417 around PS417_24490

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,314,210	-		PS417_24480	0.74	+2.0
5,314,249	-		PS417_24480	0.79	+1.0
5,314,249	-		PS417_24480	0.79	+0.8
5,314,283	+		PS417_24480	0.82	+1.8
5,314,283	+		PS417_24480	0.82	-2.0
5,314,283	+		PS417_24480	0.82	+0.6
5,314,284	-		PS417_24480	0.83	+0.4
5,314,284	-		PS417_24480	0.83	-2.4
5,314,424	+				-2.3
5,314,424	+				+1.0
5,314,436	-				+3.6
5,314,436	-				-1.4
5,314,436	-				-0.6
5,314,454	+				+1.0
5,315,074	+				+1.0
5,315,074	+				-0.0
5,315,075	-				+0.6
5,315,086	-				+0.2
5,315,149	+				-4.5
5,315,149	+				-0.1
5,315,150	-				+0.2
5,315,150	-				+0.7
5,315,150	-				-2.2
5,315,150	-				+1.0
5,315,318	-		PS417_24490	0.22	-2.2
5,315,396	+		PS417_24490	0.30	+0.3
5,315,741	-		PS417_24490	0.68	+0.2
5,315,770	+		PS417_24490	0.71	+0.4
5,315,770	+		PS417_24490	0.71	+0.1
5,315,770	+		PS417_24490	0.71	+1.4
5,315,785	+		PS417_24490	0.72	+0.2
5,315,785	+				-0.6
5,315,804	+		PS417_24490	0.74	+1.4
5,315,804	+		PS417_24490	0.74	-1.8
5,315,805	-		PS417_24490	0.74	+0.5
5,315,806	+		PS417_24490	0.75	+0.7
5,315,806	+		PS417_24490	0.75	-0.7
5,315,807	-		PS417_24490	0.75	+0.1
5,315,807	-		PS417_24490	0.75	+2.5
5,315,807	-		PS417_24490	0.75	+0.4
5,315,825	+		PS417_24490	0.77	+1.0
5,315,825	+		PS417_24490	0.77	+2.2
5,315,826	-		PS417_24490	0.77	-2.6
5,316,187	-				-2.3
5,316,646	+		PS417_24495	0.36	-0.4
5,316,647	-		PS417_24495	0.36	+0.8
5,316,781	-		PS417_24495	0.47	+0.1
5,316,846	-		PS417_24495	0.52	-2.0