Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24160 and PS417_24165 are separated by 642 nucleotides PS417_24165 and PS417_24170 overlap by 11 nucleotides
PS417_24160: PS417_24160 - hypothetical protein, at 5,234,622 to 5,235,464
_24160
PS417_24165: PS417_24165 - hypothetical protein, at 5,236,107 to 5,236,799
_24165
PS417_24170: PS417_24170 - cell division protein FtsK, at 5,236,789 to 5,242,218
_24170
Position (kb) 5236
5237 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5235.728 kb on + strand at 5235.974 kb on + strand at 5236.282 kb on - strand, within PS417_24165 at 5236.282 kb on - strand, within PS417_24165 at 5236.316 kb on - strand, within PS417_24165 at 5236.501 kb on + strand, within PS417_24165 at 5236.546 kb on - strand, within PS417_24165 at 5236.821 kb on + strand at 5236.892 kb on - strand at 5236.936 kb on + strand at 5236.937 kb on - strand at 5236.959 kb on + strand at 5236.960 kb on - strand at 5236.960 kb on - strand at 5236.969 kb on + strand at 5236.969 kb on + strand at 5236.980 kb on + strand at 5237.053 kb on - strand at 5237.074 kb on + strand at 5237.084 kb on - strand at 5237.142 kb on + strand at 5237.143 kb on - strand at 5237.143 kb on - strand at 5237.144 kb on + strand at 5237.231 kb on + strand at 5237.232 kb on - strand at 5237.353 kb on - strand, within PS417_24170 at 5237.419 kb on + strand, within PS417_24170 at 5237.452 kb on + strand, within PS417_24170 at 5237.452 kb on + strand, within PS417_24170 at 5237.452 kb on + strand, within PS417_24170 at 5237.452 kb on + strand, within PS417_24170 at 5237.452 kb on + strand, within PS417_24170 at 5237.453 kb on - strand, within PS417_24170 at 5237.453 kb on - strand, within PS417_24170 at 5237.453 kb on - strand, within PS417_24170 at 5237.454 kb on + strand, within PS417_24170 at 5237.454 kb on + strand, within PS417_24170 at 5237.454 kb on + strand, within PS417_24170 at 5237.454 kb on + strand, within PS417_24170 at 5237.454 kb on + strand, within PS417_24170 at 5237.455 kb on - strand, within PS417_24170 at 5237.455 kb on - strand, within PS417_24170 at 5237.455 kb on - strand, within PS417_24170 at 5237.455 kb on - strand, within PS417_24170 at 5237.548 kb on + strand, within PS417_24170 at 5237.559 kb on - strand, within PS417_24170 at 5237.559 kb on - strand, within PS417_24170 at 5237.626 kb on - strand, within PS417_24170 at 5237.725 kb on + strand, within PS417_24170 at 5237.726 kb on - strand, within PS417_24170 at 5237.734 kb on + strand, within PS417_24170 at 5237.734 kb on + strand, within PS417_24170 at 5237.734 kb on + strand, within PS417_24170 at 5237.735 kb on - strand, within PS417_24170 at 5237.735 kb on - strand, within PS417_24170 at 5237.736 kb on + strand, within PS417_24170 at 5237.775 kb on + strand at 5237.776 kb on - strand, within PS417_24170 at 5237.776 kb on - strand, within PS417_24170 at 5237.776 kb on - strand, within PS417_24170
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 5,235,728 + +0.7 5,235,974 + -1.4 5,236,282 - PS417_24165 0.25 -1.0 5,236,282 - PS417_24165 0.25 -0.6 5,236,316 - PS417_24165 0.30 -3.0 5,236,501 + PS417_24165 0.57 -3.3 5,236,546 - PS417_24165 0.63 +0.3 5,236,821 + +0.6 5,236,892 - -0.3 5,236,936 + +0.0 5,236,937 - +0.8 5,236,959 + -2.0 5,236,960 - -0.9 5,236,960 - +0.7 5,236,969 + +0.7 5,236,969 + -3.6 5,236,980 + +0.8 5,237,053 - -2.7 5,237,074 + -2.1 5,237,084 - +0.4 5,237,142 + +2.1 5,237,143 - -0.2 5,237,143 - -1.3 5,237,144 + -1.0 5,237,231 + -1.8 5,237,232 - -0.5 5,237,353 - PS417_24170 0.10 +0.9 5,237,419 + PS417_24170 0.12 -3.1 5,237,452 + PS417_24170 0.12 -2.4 5,237,452 + PS417_24170 0.12 -1.4 5,237,452 + PS417_24170 0.12 +0.2 5,237,452 + PS417_24170 0.12 -0.2 5,237,452 + PS417_24170 0.12 -1.8 5,237,453 - PS417_24170 0.12 -2.5 5,237,453 - PS417_24170 0.12 +0.6 5,237,453 - PS417_24170 0.12 -2.4 5,237,454 + PS417_24170 0.12 -0.2 5,237,454 + PS417_24170 0.12 +0.9 5,237,454 + PS417_24170 0.12 +1.0 5,237,454 + PS417_24170 0.12 +1.3 5,237,454 + PS417_24170 0.12 -0.1 5,237,455 - PS417_24170 0.12 -0.1 5,237,455 - PS417_24170 0.12 +1.1 5,237,455 - PS417_24170 0.12 -3.4 5,237,455 - PS417_24170 0.12 +2.2 5,237,548 + PS417_24170 0.14 -0.2 5,237,559 - PS417_24170 0.14 -2.1 5,237,559 - PS417_24170 0.14 +0.9 5,237,626 - PS417_24170 0.15 -0.1 5,237,725 + PS417_24170 0.17 -2.5 5,237,726 - PS417_24170 0.17 +0.4 5,237,734 + PS417_24170 0.17 +2.3 5,237,734 + PS417_24170 0.17 +0.5 5,237,734 + PS417_24170 0.17 -3.1 5,237,735 - PS417_24170 0.17 -3.5 5,237,735 - PS417_24170 0.17 -0.8 5,237,736 + PS417_24170 0.17 +1.7 5,237,775 + +0.3 5,237,776 - PS417_24170 0.18 -3.0 5,237,776 - PS417_24170 0.18 -1.0 5,237,776 - PS417_24170 0.18 -1.3
Or see this region's nucleotide sequence