Strain Fitness in Pseudomonas simiae WCS417 around PS417_24105

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,217,109	+				-0.4
5,217,110	-		PS417_24100	0.10	-1.5
5,217,172	+		PS417_24100	0.18	-2.1
5,217,172	+		PS417_24100	0.18	+0.1
5,217,173	-		PS417_24100	0.18	-1.5
5,217,226	+		PS417_24100	0.25	+2.1
5,217,226	+		PS417_24100	0.25	-2.8
5,217,227	-		PS417_24100	0.25	+0.5
5,217,227	-		PS417_24100	0.25	-1.8
5,217,227	-		PS417_24100	0.25	-1.3
5,217,227	-		PS417_24100	0.25	-0.9
5,217,389	-		PS417_24100	0.46	-0.4
5,217,461	-		PS417_24100	0.56	-0.9
5,217,463	+		PS417_24100	0.56	-1.8
5,217,584	-		PS417_24100	0.72	-2.5
5,217,584	-		PS417_24100	0.72	+0.3
5,217,584	-		PS417_24100	0.72	-4.5
5,217,587	+		PS417_24100	0.72	-1.7
5,217,841	-				-0.6
5,217,871	+				-2.2
5,217,872	-				-0.7
5,217,872	-				-1.4
5,217,920	+				-1.0
5,217,921	-				-0.9
5,217,921	-				-1.8
5,217,972	-				-0.4
5,218,074	+				-2.1
5,218,075	-				+1.0
5,218,119	-				+2.1
5,218,130	-				-1.7
5,218,130	-				+0.3
5,218,130	-				+0.4
5,218,187	+				+0.9
5,218,187	+				+0.9
5,218,323	+		PS417_24105	0.16	+1.1
5,218,408	+		PS417_24105	0.21	+1.4
5,218,409	-		PS417_24105	0.21	-2.3
5,218,516	-		PS417_24105	0.27	-0.0
5,218,767	+		PS417_24105	0.42	+0.2
5,218,767	+		PS417_24105	0.42	-1.8
5,218,768	-		PS417_24105	0.42	+1.9
5,218,768	-		PS417_24105	0.42	-3.9
5,219,020	+		PS417_24105	0.57	-0.4
5,219,030	+		PS417_24105	0.58	-0.8
5,219,031	-		PS417_24105	0.58	-1.7
5,219,082	+		PS417_24105	0.61	-0.8
5,219,082	+		PS417_24105	0.61	+0.9
5,219,082	+		PS417_24105	0.61	-1.1
5,219,083	-		PS417_24105	0.61	-1.7
5,219,083	-		PS417_24105	0.61	-0.5
5,219,083	-		PS417_24105	0.61	+0.6
5,219,083	-		PS417_24105	0.61	+0.3
5,219,274	-		PS417_24105	0.72	+1.1
5,219,274	-		PS417_24105	0.72	-0.3
5,219,274	-		PS417_24105	0.72	+0.7
5,219,282	-		PS417_24105	0.73	+0.0
5,219,296	-		PS417_24105	0.73	-0.4
5,219,296	-		PS417_24105	0.73	-0.1
5,219,358	+		PS417_24105	0.77	+2.6
5,219,359	-		PS417_24105	0.77	-0.5
5,219,657	+				-2.2
5,219,658	-				+0.3
5,219,746	-				+0.2
5,219,746	-				-2.1
5,219,758	+				-1.8
5,219,758	+				-0.3
5,219,759	-				+0.8
5,219,759	-				+0.2
5,219,759	-				-2.1
5,219,759	-				+1.1
5,219,759	-				+1.2
5,219,761	+				-0.6
5,219,766	+				-1.7
5,219,801	+				+0.7
5,219,801	+				-1.2
5,219,802	-				+0.4
5,220,011	-				+0.3
5,220,011	-				+0.6
5,220,468	+		PS417_24110	0.23	-2.8
5,220,594	+		PS417_24110	0.28	-0.3
5,220,594	+		PS417_24110	0.28	+0.6
5,220,607	+		PS417_24110	0.28	+1.2
5,220,607	+		PS417_24110	0.28	-0.0
5,220,608	-		PS417_24110	0.28	+0.7
5,220,608	-		PS417_24110	0.28	-0.1