Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24060 and PS417_24065 are separated by 102 nucleotides PS417_24065 and PS417_24070 are separated by 254 nucleotides PS417_24070 and PS417_24075 are separated by 86 nucleotides PS417_24075 and PS417_24080 are separated by 98 nucleotides
PS417_24060: PS417_24060 - molecular chaperone DnaK, at 5,209,919 to 5,211,841
_24060
PS417_24065: PS417_24065 - heat shock protein GrpE, at 5,211,944 to 5,212,507
_24065
PS417_24070: PS417_24070 - recombination and repair protein, at 5,212,762 to 5,214,435
_24070
PS417_24075: PS417_24075 - Fur family transcriptional regulator, at 5,214,522 to 5,214,926
_24075
PS417_24080: PS417_24080 - membrane protein, at 5,215,025 to 5,215,552
_24080
Position (kb) 5212
5213
5214
5215 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5212.725 kb on + strand at 5212.781 kb on + strand at 5212.785 kb on + strand at 5212.786 kb on - strand at 5212.789 kb on + strand at 5212.790 kb on - strand at 5212.839 kb on - strand at 5213.020 kb on - strand, within PS417_24070 at 5213.113 kb on - strand, within PS417_24070 at 5213.206 kb on + strand, within PS417_24070 at 5213.680 kb on - strand, within PS417_24070 at 5213.686 kb on + strand, within PS417_24070 at 5213.788 kb on - strand, within PS417_24070 at 5213.788 kb on - strand, within PS417_24070 at 5214.005 kb on + strand, within PS417_24070 at 5214.102 kb on + strand, within PS417_24070 at 5214.102 kb on + strand, within PS417_24070 at 5214.103 kb on - strand, within PS417_24070 at 5214.210 kb on + strand, within PS417_24070 at 5214.210 kb on + strand, within PS417_24070 at 5214.210 kb on + strand, within PS417_24070 at 5214.211 kb on - strand, within PS417_24070 at 5214.221 kb on + strand, within PS417_24070 at 5214.221 kb on + strand, within PS417_24070 at 5214.222 kb on - strand, within PS417_24070 at 5214.443 kb on - strand at 5214.443 kb on - strand at 5214.454 kb on + strand at 5214.455 kb on - strand at 5214.456 kb on + strand at 5214.456 kb on + strand at 5214.456 kb on + strand at 5214.457 kb on - strand at 5214.457 kb on - strand at 5214.477 kb on + strand at 5214.478 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 5,212,725 + +1.3 5,212,781 + +0.4 5,212,785 + +0.1 5,212,786 - -1.7 5,212,789 + -1.4 5,212,790 - +0.7 5,212,839 - +0.0 5,213,020 - PS417_24070 0.15 -1.0 5,213,113 - PS417_24070 0.21 -3.1 5,213,206 + PS417_24070 0.27 -4.0 5,213,680 - PS417_24070 0.55 -2.0 5,213,686 + PS417_24070 0.55 -0.3 5,213,788 - PS417_24070 0.61 -1.0 5,213,788 - PS417_24070 0.61 -0.3 5,214,005 + PS417_24070 0.74 -0.4 5,214,102 + PS417_24070 0.80 -1.1 5,214,102 + PS417_24070 0.80 +1.3 5,214,103 - PS417_24070 0.80 -2.9 5,214,210 + PS417_24070 0.86 -4.4 5,214,210 + PS417_24070 0.86 -2.9 5,214,210 + PS417_24070 0.86 -2.0 5,214,211 - PS417_24070 0.87 -2.0 5,214,221 + PS417_24070 0.87 -3.0 5,214,221 + PS417_24070 0.87 -1.9 5,214,222 - PS417_24070 0.87 +0.0 5,214,443 - +0.5 5,214,443 - -0.4 5,214,454 + -3.2 5,214,455 - -0.6 5,214,456 + -0.2 5,214,456 + -0.1 5,214,456 + +0.7 5,214,457 - +1.3 5,214,457 - -0.5 5,214,477 + +1.5 5,214,478 - -0.5
Or see this region's nucleotide sequence