Strain Fitness in Pseudomonas simiae WCS417 around PS417_23740

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,131,512	+		PS417_23730	0.72	+1.4
5,131,531	+		PS417_23730	0.74	-0.6
5,131,531	+		PS417_23730	0.74	-0.4
5,131,532	-		PS417_23730	0.74	+0.9
5,131,627	-		PS417_23730	0.84	+0.6
5,131,651	+				-0.3
5,131,651	+		PS417_23730	0.87	+0.0
5,131,651	+		PS417_23730	0.87	+0.4
5,131,652	-		PS417_23730	0.87	+1.5
5,131,686	+				+2.2
5,131,686	+				+1.7
5,131,687	-				-2.6
5,131,687	-				+0.3
5,131,687	-				+0.3
5,131,702	+				+0.6
5,131,703	-				+1.3
5,131,703	-				-2.8
5,131,703	-				+0.7
5,131,761	-				+1.0
5,131,761	-				-0.2
5,131,836	+				+1.5
5,131,836	+				-1.3
5,131,880	+				-2.8
5,131,881	-				+0.7
5,131,937	+				+0.5
5,131,937	+				+1.2
5,131,938	-				-1.7
5,131,969	+				-4.1
5,132,085	-				-0.7
5,132,085	-				-0.8
5,132,085	-				-0.5
5,132,113	-				+1.1
5,132,176	+				-0.3
5,132,176	+		PS417_23735	0.24	-1.3
5,132,263	+		PS417_23735	0.54	-0.8
5,132,314	+		PS417_23735	0.71	+1.7
5,132,314	+		PS417_23735	0.71	-0.1
5,132,332	+		PS417_23735	0.77	+0.0
5,132,332	+		PS417_23735	0.77	-1.4
5,132,333	-		PS417_23735	0.78	+1.0
5,132,333	-		PS417_23735	0.78	-2.4
5,132,360	+		PS417_23735	0.87	+0.3
5,132,361	-		PS417_23735	0.87	+0.5
5,132,438	+				+0.2
5,132,439	-				-2.9
5,132,439	-				+0.5
5,132,445	-				-0.1
5,132,579	+		PS417_23740	0.14	+1.5
5,132,579	+		PS417_23740	0.14	-2.4
5,132,579	+		PS417_23740	0.14	+0.5
5,132,580	-				-0.7
5,132,580	-		PS417_23740	0.14	+0.6
5,132,580	-		PS417_23740	0.14	+0.0
5,132,580	-		PS417_23740	0.14	-0.2
5,132,582	+		PS417_23740	0.15	+0.4
5,132,641	+		PS417_23740	0.21	-0.6
5,132,648	+		PS417_23740	0.22	-3.8
5,132,648	+		PS417_23740	0.22	+1.3
5,132,648	+		PS417_23740	0.22	+0.7
5,132,649	-		PS417_23740	0.22	+0.5
5,132,649	-		PS417_23740	0.22	+1.5
5,132,650	+		PS417_23740	0.22	-1.0
5,132,650	+		PS417_23740	0.22	+0.1
5,132,651	-		PS417_23740	0.22	-1.3
5,132,651	-		PS417_23740	0.22	+0.9
5,132,651	-		PS417_23740	0.22	+0.4
5,132,651	-		PS417_23740	0.22	+1.8
5,132,741	+		PS417_23740	0.31	+0.9
5,132,742	-		PS417_23740	0.32	+1.9
5,132,851	-		PS417_23740	0.43	-1.4
5,132,966	+		PS417_23740	0.55	+0.7
5,132,967	-		PS417_23740	0.55	-0.1
5,133,105	-		PS417_23740	0.70	+0.8
5,133,105	-		PS417_23740	0.70	+1.0
5,133,105	-		PS417_23740	0.70	+1.0
5,133,142	+		PS417_23740	0.74	+0.7
5,133,142	+		PS417_23740	0.74	+0.6
5,133,280	-		PS417_23740	0.88	+0.5
5,133,504	-		PS417_23745	0.13	+1.3
5,133,575	-		PS417_23745	0.22	+0.2
5,133,600	+		PS417_23745	0.25	-0.3
5,133,600	+		PS417_23745	0.25	+0.5
5,133,601	-		PS417_23745	0.25	-0.7
5,133,603	+		PS417_23745	0.25	+0.6
5,133,628	-		PS417_23745	0.28	-1.7
5,133,684	-				+0.3
5,133,712	+		PS417_23745	0.38	+0.6
5,133,712	+		PS417_23745	0.38	-0.1
5,133,712	+		PS417_23745	0.38	-1.3
5,133,713	-		PS417_23745	0.38	-0.3
5,133,713	-		PS417_23745	0.38	+0.3
5,133,738	+		PS417_23745	0.41	-0.7
5,133,756	+		PS417_23745	0.43	+0.9
5,133,757	-		PS417_23745	0.43	+0.3
5,133,763	+		PS417_23745	0.44	+0.2
5,133,764	-		PS417_23745	0.44	+1.1
5,133,864	+		PS417_23745	0.56	+0.3
5,133,864	+		PS417_23745	0.56	+0.1
5,133,865	-		PS417_23745	0.56	-2.3
5,133,865	-		PS417_23745	0.56	-0.9
5,134,032	+		PS417_23745	0.76	+0.3
5,134,033	-		PS417_23745	0.76	+0.6
5,134,049	+		PS417_23745	0.78	+0.1
5,134,050	-		PS417_23745	0.78	+1.1
5,134,050	-		PS417_23745	0.78	-0.7
5,134,050	-		PS417_23745	0.78	+0.6
5,134,050	-		PS417_23745	0.78	-0.2
5,134,051	+		PS417_23745	0.78	+0.4
5,134,051	+		PS417_23745	0.78	-2.3
5,134,052	-		PS417_23745	0.78	-3.2
5,134,052	-		PS417_23745	0.78	-2.3
5,134,060	-		PS417_23745	0.79	-2.1
5,134,105	-		PS417_23745	0.84	-0.6
5,134,105	-		PS417_23745	0.84	-1.0
5,134,105	-		PS417_23745	0.84	-1.0
5,134,190	+				+1.0
5,134,251	-				+2.3
5,134,273	+				-1.3
5,134,273	+				-0.4
5,134,273	+				+0.4
5,134,273	+				-1.8
5,134,273	+				-3.8
5,134,274	-				-1.8
5,134,274	-				+0.7
5,134,279	-				+0.6
5,134,319	-				+1.2
5,134,326	-				-0.1
5,134,326	-				+0.5
5,134,383	-				+0.1
5,134,383	-				-1.7
5,134,386	+				-0.1
5,134,387	-				-1.0
5,134,387	-				-2.4