Strain Fitness in Pseudomonas simiae WCS417 around PS417_23695

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,122,354	+		PS417_23685	0.68	+0.2
5,122,712	+				-1.9
5,122,713	-				+0.6
5,122,713	-				-1.0
5,122,814	-				+0.5
5,122,876	+		PS417_23690	0.16	+0.1
5,122,876	+		PS417_23690	0.16	-2.5
5,122,876	+		PS417_23690	0.16	+0.6
5,122,876	+		PS417_23690	0.16	+0.0
5,122,939	+		PS417_23690	0.29	-0.3
5,122,940	-		PS417_23690	0.29	+3.3
5,122,940	-		PS417_23690	0.29	-0.1
5,122,975	+		PS417_23690	0.37	-1.7
5,122,975	+		PS417_23690	0.37	-0.3
5,122,975	+		PS417_23690	0.37	+0.8
5,122,975	+		PS417_23690	0.37	+0.4
5,122,976	-		PS417_23690	0.37	-1.6
5,122,976	-		PS417_23690	0.37	-0.4
5,122,978	+		PS417_23690	0.37	-2.0
5,122,979	-		PS417_23690	0.37	+0.5
5,123,170	+		PS417_23690	0.76	-0.8
5,123,170	+		PS417_23690	0.76	-0.7
5,123,170	+		PS417_23690	0.76	+0.2
5,123,170	+		PS417_23690	0.76	+1.4
5,123,171	-		PS417_23690	0.76	+0.1
5,123,185	+		PS417_23690	0.79	+1.6
5,123,332	+				-0.3
5,123,332	+				+1.3
5,123,332	+				-0.6
5,123,332	+				+2.2
5,123,333	-				-2.4
5,123,333	-				+3.5
5,123,333	-				-2.8
5,123,333	-				+0.4
5,123,336	+				+0.4
5,123,336	+				+0.8
5,123,522	-		PS417_23695	0.17	-0.2
5,123,533	+		PS417_23695	0.18	-1.0
5,123,533	+		PS417_23695	0.18	-1.5
5,123,534	-		PS417_23695	0.18	-2.3
5,123,534	-		PS417_23695	0.18	+0.9
5,123,623	+		PS417_23695	0.27	-0.5
5,123,624	-		PS417_23695	0.27	-0.2
5,123,767	+		PS417_23695	0.41	-0.5
5,123,884	+		PS417_23695	0.53	-1.5
5,123,948	-		PS417_23695	0.59	-0.3
5,124,016	-		PS417_23695	0.66	+1.8
5,124,064	+		PS417_23695	0.71	-0.3
5,124,067	+		PS417_23695	0.71	-0.7
5,124,068	-		PS417_23695	0.71	-0.8
5,124,068	-		PS417_23695	0.71	-0.8
5,124,092	+		PS417_23695	0.73	-2.4
5,124,111	-		PS417_23695	0.75	-0.1
5,124,118	+		PS417_23695	0.76	-0.7
5,124,118	+		PS417_23695	0.76	+3.6
5,124,119	-		PS417_23695	0.76	+0.5
5,124,246	+		PS417_23695	0.89	+0.4
5,124,246	+		PS417_23695	0.89	-0.9
5,124,247	-		PS417_23695	0.89	-0.6
5,124,247	-		PS417_23695	0.89	+1.3
5,124,250	+		PS417_23695	0.89	-1.0
5,124,250	+		PS417_23695	0.89	-1.2
5,124,250	+		PS417_23695	0.89	+1.6
5,124,251	-		PS417_23695	0.89	+0.5
5,124,329	-				-0.3
5,124,332	-				+1.1
5,124,351	+				-1.0
5,124,352	-				-0.2
5,124,354	+				-2.3
5,124,354	+				+3.1
5,124,355	-				-3.4
5,124,355	-				+0.5
5,124,355	-				-2.4
5,124,355	-				-1.5
5,124,688	+		PS417_23700	0.18	-0.1
5,124,689	-				-0.7
5,124,727	+		PS417_23700	0.21	+0.1
5,124,739	+		PS417_23700	0.22	-2.5
5,124,739	+		PS417_23700	0.22	+0.2
5,124,740	-		PS417_23700	0.22	+0.5
5,124,781	+		PS417_23700	0.25	-1.0
5,124,782	-		PS417_23700	0.25	-0.3
5,124,782	-		PS417_23700	0.25	+0.8
5,124,782	-		PS417_23700	0.25	-0.2
5,124,950	-		PS417_23700	0.37	+0.5