Strain Fitness in Pseudomonas simiae WCS417 around PS417_23345

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
5,052,425	+		PS417_23340	0.14	-1.5
5,052,490	-		PS417_23340	0.21	-0.1
5,052,533	+				-0.3
5,052,533	+		PS417_23340	0.25	+0.2
5,052,534	-		PS417_23340	0.25	+0.7
5,052,596	+		PS417_23340	0.31	+0.2
5,052,596	+		PS417_23340	0.31	-0.1
5,052,681	+		PS417_23340	0.40	-0.2
5,052,681	+		PS417_23340	0.40	-1.1
5,052,681	+		PS417_23340	0.40	+0.4
5,052,681	+		PS417_23340	0.40	-2.9
5,052,682	-		PS417_23340	0.40	+2.0
5,053,251	-				-0.2
5,053,354	+				+0.1
5,053,355	-				+1.5
5,053,416	+		PS417_23345	0.11	+1.8
5,053,417	-		PS417_23345	0.11	+2.4
5,053,603	+		PS417_23345	0.29	+0.6
5,053,604	-		PS417_23345	0.29	+0.1
5,053,723	-		PS417_23345	0.41	+0.8
5,053,816	-		PS417_23345	0.50	-2.8
5,053,816	-		PS417_23345	0.50	+0.1
5,053,816	-		PS417_23345	0.50	-1.7
5,053,840	-		PS417_23345	0.52	+0.2
5,054,388	+				-2.5
5,054,388	+				+0.9
5,054,389	-				+2.4
5,054,390	+				+2.0
5,054,406	+				-1.9
5,054,407	-				-0.2
5,054,663	+		PS417_23350	0.20	-0.6
5,054,663	+		PS417_23350	0.20	+0.3
5,054,664	-				+2.6
5,054,664	-		PS417_23350	0.21	-0.1
5,054,664	-		PS417_23350	0.21	+3.0
5,054,664	-		PS417_23350	0.21	+0.2
5,054,687	+		PS417_23350	0.23	-0.2
5,054,687	+		PS417_23350	0.23	+0.5
5,054,705	-		PS417_23350	0.25	-1.0
5,054,705	-		PS417_23350	0.25	+0.8
5,054,738	+		PS417_23350	0.29	-0.4
5,054,739	-		PS417_23350	0.29	+0.9
5,054,739	-		PS417_23350	0.29	+0.3
5,054,841	+		PS417_23350	0.40	+1.1
5,054,841	+		PS417_23350	0.40	+1.5
5,054,842	-		PS417_23350	0.40	-0.7
5,054,842	-		PS417_23350	0.40	+1.2
5,054,842	-		PS417_23350	0.40	+0.7
5,054,842	-		PS417_23350	0.40	+0.4
5,055,117	-		PS417_23350	0.71	+0.2
5,055,143	+		PS417_23350	0.74	-3.1
5,055,143	+		PS417_23350	0.74	+1.7
5,055,143	+		PS417_23350	0.74	+0.3
5,055,143	+		PS417_23350	0.74	-0.4
5,055,143	+		PS417_23350	0.74	+1.5
5,055,144	-		PS417_23350	0.74	-0.2
5,055,144	-		PS417_23350	0.74	+0.2
5,055,144	-		PS417_23350	0.74	-2.7
5,055,198	-		PS417_23350	0.80	-0.7
5,055,249	-		PS417_23350	0.86	-2.2