Strain Fitness in Pseudomonas simiae WCS417 around PS417_23000

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,980,941	-				+0.2
4,980,941	-		PS417_22995	0.79	-0.0
4,981,135	-		PS417_22995	0.86	+0.2
4,981,262	-				-1.4
4,981,510	-				+0.3
4,981,510	-				+0.3
4,981,845	+		PS417_23000	0.20	-0.3
4,981,991	+		PS417_23000	0.28	+0.5
4,981,991	+		PS417_23000	0.28	+0.2
4,982,097	-		PS417_23000	0.35	-3.3
4,982,110	+		PS417_23000	0.35	+3.0
4,982,111	-		PS417_23000	0.35	-1.2
4,982,170	-		PS417_23000	0.39	-0.8
4,982,435	+		PS417_23000	0.54	-0.1
4,982,435	+		PS417_23000	0.54	+0.8
4,982,435	+		PS417_23000	0.54	-2.1
4,982,436	-		PS417_23000	0.54	-1.1
4,982,436	-		PS417_23000	0.54	-1.3
4,982,436	-		PS417_23000	0.54	-3.9
4,982,460	-		PS417_23000	0.56	-2.7
4,982,544	+		PS417_23000	0.61	-0.2
4,982,556	+		PS417_23000	0.62	-0.1
4,982,557	-		PS417_23000	0.62	+0.3
4,982,557	-		PS417_23000	0.62	+1.6
4,982,559	+		PS417_23000	0.62	-2.3
4,982,559	+		PS417_23000	0.62	+1.2
4,982,574	+		PS417_23000	0.63	-0.8
4,982,575	-		PS417_23000	0.63	-2.6
4,982,670	+		PS417_23000	0.68	-0.4
4,982,670	+		PS417_23000	0.68	-2.5
4,982,858	+		PS417_23000	0.79	+0.8
4,982,858	+		PS417_23000	0.79	-1.0
4,982,911	+		PS417_23000	0.82	+0.3
4,983,325	+		PS417_23005	0.14	-3.9
4,983,325	+		PS417_23005	0.14	+1.0
4,983,326	-		PS417_23005	0.15	+0.2
4,983,348	+		PS417_23005	0.22	+0.5
4,983,520	+		PS417_23005	0.82	-0.1
4,983,536	+		PS417_23005	0.88	+1.7
4,983,629	+				-0.6
4,983,629	+				-1.6
4,983,629	+				-0.4
4,983,629	+				-0.8
4,983,630	-				+2.1
4,983,630	-				-2.2
4,983,630	-				-0.6
4,983,654	+				-2.6
4,983,754	+				-2.5
4,983,825	-				+1.0
4,983,842	+				+1.5
4,983,843	-				+0.0
4,983,907	+				-3.1
4,983,931	+				-3.2
4,983,932	-				+2.2
4,983,932	-				-2.9
4,984,110	-				+0.3
4,984,150	+				-0.5
4,984,166	-		PS417_23015	0.14	-1.2
4,984,166	-		PS417_23015	0.14	+0.6