Experiment: methylglyoxal 0.032 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22905 and PS417_22910 are separated by 45 nucleotides PS417_22910 and PS417_22915 are separated by 2 nucleotides PS417_22915 and PS417_22920 are separated by 5 nucleotides PS417_22920 and PS417_22925 are separated by 250 nucleotides
PS417_22905: PS417_22905 - 50S ribosomal protein L19, at 4,963,690 to 4,964,040
_22905
PS417_22910: PS417_22910 - tRNA (guanine-N1)-methyltransferase, at 4,964,086 to 4,964,838
_22910
PS417_22915: PS417_22915 - 16S rRNA processing protein RimM, at 4,964,841 to 4,965,377
_22915
PS417_22920: PS417_22920 - 30S ribosomal protein S16, at 4,965,383 to 4,965,634
_22920
PS417_22925: PS417_22925 - RNA-binding protein, at 4,965,885 to 4,967,261
_22925
Position (kb)
4964
4965
4966 Strain fitness (log2 ratio)
-2
-1
0
1 at 4964.057 kb on - strand at 4964.057 kb on - strand at 4964.071 kb on - strand at 4964.843 kb on - strand at 4965.778 kb on - strand at 4965.780 kb on - strand at 4965.881 kb on + strand at 4965.917 kb on + strand at 4965.917 kb on + strand at 4965.917 kb on + strand at 4965.917 kb on + strand at 4965.918 kb on - strand at 4965.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.032 vol% remove 4,964,057 - -1.9 4,964,057 - -1.9 4,964,071 - -0.5 4,964,843 - -0.5 4,965,778 - +0.6 4,965,780 - -0.3 4,965,881 + -0.4 4,965,917 + +1.4 4,965,917 + -1.0 4,965,917 + +0.3 4,965,917 + +1.0 4,965,918 - -0.1 4,965,918 - +1.1
Or see this region's nucleotide sequence