Strain Fitness in Pseudomonas simiae WCS417 around PS417_22715

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,919,966	+		PS417_22710	0.69	+0.4
4,919,967	-		PS417_22710	0.69	+0.7
4,919,984	+		PS417_22710	0.69	+0.9
4,920,072	-		PS417_22710	0.73	+3.0
4,920,072	-				+2.4
4,920,176	+		PS417_22710	0.77	+2.0
4,920,176	+		PS417_22710	0.77	-1.0
4,920,332	+		PS417_22710	0.83	-0.2
4,920,332	+		PS417_22710	0.83	+0.4
4,920,333	-		PS417_22710	0.83	+0.0
4,920,333	-		PS417_22710	0.83	-1.0
4,920,353	+		PS417_22710	0.84	+1.7
4,920,354	-		PS417_22710	0.84	+1.1
4,920,354	-		PS417_22710	0.84	-2.1
4,920,360	-		PS417_22710	0.84	+0.9
4,920,360	-		PS417_22710	0.84	-1.4
4,920,431	+		PS417_22710	0.87	+0.1
4,920,446	+		PS417_22710	0.87	+4.0
4,920,446	+		PS417_22710	0.87	-0.5
4,920,446	+		PS417_22710	0.87	+1.5
4,920,446	+		PS417_22710	0.87	+0.8
4,920,447	-		PS417_22710	0.87	+0.3
4,920,581	+				+0.9
4,920,621	-				+1.9
4,920,641	+				+0.9
4,920,642	-				-1.1
4,920,642	-				-2.4
4,920,669	-				+1.2
4,920,952	+				-0.2
4,920,978	-				+0.5
4,921,072	-				-0.6
4,921,072	-		PS417_22715	0.25	-2.9
4,921,313	-		PS417_22715	0.65	-0.8
4,921,484	-				+2.8
4,921,584	+				+1.2
4,921,599	-				-0.7
4,921,644	+				+0.8
4,921,749	+		PS417_22720	0.15	+0.3
4,921,749	+		PS417_22720	0.15	+1.6
4,921,749	+		PS417_22720	0.15	+0.6
4,921,750	-		PS417_22720	0.15	+0.7
4,921,750	-		PS417_22720	0.15	-0.9
4,922,086	+				-1.2
4,922,087	-				+1.1
4,922,087	-				+2.1
4,922,087	-				+0.6
4,922,087	-				+1.0
4,922,101	-				-2.8
4,922,101	-				+0.5
4,922,101	-				+0.0
4,922,108	-				+0.2
4,922,168	-				+0.5
4,922,168	-				-0.0
4,922,193	+				-0.4
4,922,193	+				-3.0
4,922,194	-				-3.3
4,922,194	-				-0.3
4,922,194	-				-2.6
4,922,229	+				-1.4
4,922,229	+				-1.4
4,922,229	+				-0.4
4,922,229	+				+3.0
4,922,230	-				-1.1