Strain Fitness in Pseudomonas simiae WCS417 around PS417_22030

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,775,356	+				+0.9
4,775,673	+		PS417_22025	0.33	+0.3
4,775,883	-		PS417_22025	0.57	-1.6
4,776,014	+		PS417_22025	0.72	-0.4
4,776,261	-				-1.9
4,776,261	-				-1.6
4,776,360	+				-0.1
4,776,360	+				+1.9
4,776,361	-				+0.8
4,776,395	+				+1.3
4,776,395	+				-0.1
4,776,501	+		PS417_22030	0.25	-1.8
4,776,502	-		PS417_22030	0.25	-1.1
4,776,502	-		PS417_22030	0.25	+1.1
4,776,564	+		PS417_22030	0.35	-0.5
4,776,783	+		PS417_22030	0.71	+1.2
4,776,784	-		PS417_22030	0.71	+0.8
4,776,819	+		PS417_22030	0.77	-0.4
4,776,820	-		PS417_22030	0.77	+1.5
4,777,084	-				+0.7
4,777,122	+				-0.9
4,777,122	+				-2.4
4,777,122	+				+0.5
4,777,122	+				+0.4
4,777,122	+				-2.3
4,777,123	-				-1.0
4,777,123	-				+0.2
4,777,123	-				-0.5
4,777,134	+				+0.0
4,777,134	+				+0.3
4,777,135	-				-1.3
4,777,135	-				-0.4
4,777,141	+				+0.7
4,777,141	+				-2.0
4,777,142	-				+1.2
4,777,162	+				+0.1
4,777,163	-				+1.2
4,777,163	-				-0.3
4,777,260	-		PS417_22040	0.14	-3.2
4,777,499	+		PS417_22040	0.68	+0.6
4,777,499	+		PS417_22040	0.68	+0.5
4,777,500	-		PS417_22040	0.68	+0.7
4,777,500	-				+2.0
4,777,565	+		PS417_22040	0.83	-0.8
4,777,565	+		PS417_22040	0.83	+0.1
4,777,849	+		PS417_22045	0.15	-0.3
4,777,850	-		PS417_22045	0.15	+0.5