Strain Fitness in Pseudomonas simiae WCS417 around PS417_21200

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,609,340	+				+0.1
4,609,340	+				-3.7
4,609,341	-				-0.9
4,609,343	+				+2.2
4,609,343	+				+0.1
4,609,348	-				-0.5
4,609,348	-				+0.4
4,609,355	+				+0.9
4,609,356	-				-1.9
4,609,356	-				+1.5
4,609,367	+				-1.7
4,609,367	+				+1.9
4,609,726	-		PS417_21195	0.49	-0.1
4,609,829	+		PS417_21195	0.64	-0.6
4,609,830	-		PS417_21195	0.65	+0.7
4,609,830	-		PS417_21195	0.65	+2.5
4,610,073	+				+0.4
4,610,073	+				-3.1
4,610,074	-				-0.9
4,610,074	-				-0.0
4,610,089	+				-0.5
4,610,124	+				+0.9
4,610,124	+				-0.8
4,610,125	-				+1.0
4,610,173	+				+0.1
4,610,174	-				-1.2
4,610,193	+				+0.9
4,610,194	-				+1.1
4,610,205	-				-1.7
4,610,212	-				+1.0
4,610,217	+				+0.8
4,610,217	+				-0.0
4,610,225	+				-2.8
4,610,226	-				-0.2
4,610,251	+				+0.5
4,610,251	+				+1.2
4,610,411	+		PS417_21200	0.17	-0.8
4,610,519	+		PS417_21200	0.32	-0.4
4,610,519	+		PS417_21200	0.32	-1.5
4,610,519	+		PS417_21200	0.32	-0.5
4,610,520	-		PS417_21200	0.32	-3.8
4,610,520	-		PS417_21200	0.32	-1.9
4,610,520	-		PS417_21200	0.32	-1.9
4,610,520	-		PS417_21200	0.32	-2.6
4,610,520	-		PS417_21200	0.32	-0.5
4,610,654	+		PS417_21200	0.50	-0.9
4,610,654	+		PS417_21200	0.50	+0.0
4,610,654	+		PS417_21200	0.50	+3.0
4,610,655	-		PS417_21200	0.50	-1.1
4,610,655	-		PS417_21200	0.50	-0.3
4,610,845	+		PS417_21200	0.76	+1.3
4,610,845	+		PS417_21200	0.76	-0.5
4,610,845	+		PS417_21200	0.76	-0.2
4,610,845	+		PS417_21200	0.76	-3.1
4,610,846	-		PS417_21200	0.77	+0.9
4,610,846	-		PS417_21200	0.77	-1.5
4,610,846	-		PS417_21200	0.77	+0.6
4,610,846	-		PS417_21200	0.77	-0.6
4,610,884	-		PS417_21200	0.82	+0.3
4,610,976	+				-0.2
4,610,976	+				-0.9
4,610,977	-				-0.9
4,610,977	-				+0.7
4,610,977	-				+1.2
4,611,084	+				+1.1
4,611,084	+				+1.2
4,611,084	+				-1.0
4,611,088	+				+0.3
4,611,161	-				-2.5
4,611,259	-				-0.9
4,611,259	-		PS417_21205	0.11	+1.7
4,611,407	+		PS417_21205	0.26	+0.6
4,611,407	+		PS417_21205	0.26	+0.5
4,611,407	+		PS417_21205	0.26	-2.1
4,611,407	+		PS417_21205	0.26	-0.3
4,611,408	-		PS417_21205	0.26	-1.2
4,611,408	-		PS417_21205	0.26	-1.9
4,611,408	-		PS417_21205	0.26	+0.2
4,611,408	-				+0.1
4,611,473	+		PS417_21205	0.33	+0.5
4,611,473	+		PS417_21205	0.33	-1.9
4,611,474	-		PS417_21205	0.33	-0.1
4,611,475	+		PS417_21205	0.33	-1.2
4,611,475	+		PS417_21205	0.33	+1.0
4,611,475	+		PS417_21205	0.33	+0.3
4,611,475	+		PS417_21205	0.33	-0.9
4,611,475	+		PS417_21205	0.33	-1.2
4,611,476	-		PS417_21205	0.33	-1.9
4,611,476	-		PS417_21205	0.33	-0.0
4,611,476	-		PS417_21205	0.33	-0.1
4,611,520	-		PS417_21205	0.38	+0.6
4,611,578	+		PS417_21205	0.44	-0.3
4,611,578	+		PS417_21205	0.44	+0.8
4,611,579	-		PS417_21205	0.44	+0.5
4,611,579	-		PS417_21205	0.44	-1.7
4,611,609	-		PS417_21205	0.47	+0.4
4,611,740	+				+0.1
4,611,741	-		PS417_21205	0.60	+1.5
4,611,818	+		PS417_21205	0.68	-4.1
4,611,909	+		PS417_21205	0.78	-1.9
4,611,910	-		PS417_21205	0.78	-3.1
4,612,001	+		PS417_21205	0.87	-1.7
4,612,002	-		PS417_21205	0.87	-1.2
4,612,002	-		PS417_21205	0.87	-0.1
4,612,002	-		PS417_21205	0.87	+2.3