Strain Fitness in Pseudomonas simiae WCS417 around PS417_21120

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,595,044	-				+0.6
4,595,128	-				-3.0
4,595,128	-				+0.5
4,595,133	+				+0.1
4,595,213	-				-3.2
4,595,237	-		PS417_21110	0.11	-1.9
4,595,237	-		PS417_21110	0.11	+0.0
4,595,259	+		PS417_21110	0.18	+0.9
4,595,292	+		PS417_21110	0.29	-2.1
4,595,348	+		PS417_21110	0.47	-3.1
4,595,361	-		PS417_21110	0.51	-0.8
4,595,452	+		PS417_21110	0.82	+0.6
4,595,452	+		PS417_21110	0.82	+1.1
4,595,452	+		PS417_21110	0.82	-1.5
4,595,453	-				-0.1
4,595,453	-		PS417_21110	0.82	+0.3
4,595,479	-				+0.4
4,595,521	+				-1.2
4,595,521	+				+0.1
4,595,523	+				+1.6
4,595,831	-				+0.5
4,595,831	-				+0.6
4,595,837	+				+0.1
4,595,838	-				-2.2
4,595,867	+				+1.1
4,595,868	-				+1.3
4,595,878	+				+0.1
4,596,045	+				+1.5
4,596,045	+				+1.3
4,596,045	+				+1.1
4,596,046	-				+1.1
4,596,143	+		PS417_21120	0.25	-1.6
4,596,144	-		PS417_21120	0.26	-1.5
4,596,144	-		PS417_21120	0.26	-2.4
4,596,173	+		PS417_21120	0.30	+2.6
4,596,231	-		PS417_21120	0.40	-0.2
4,596,488	+		PS417_21120	0.81	-1.8
4,596,488	+		PS417_21120	0.81	-2.5
4,596,489	-		PS417_21120	0.81	-1.5
4,596,507	+		PS417_21120	0.84	-2.9
4,596,620	+				-0.3
4,596,621	-				-2.1
4,596,702	-				+0.9
4,596,717	+				+1.6
4,596,717	+				+0.6
4,596,717	+				-2.4
4,596,718	-				+3.2
4,596,795	+				+4.1
4,596,932	-		PS417_21125	0.24	+4.0
4,596,969	+		PS417_21125	0.29	+5.0
4,596,989	-		PS417_21125	0.32	+2.0
4,597,080	+		PS417_21125	0.44	+4.4
4,597,081	-		PS417_21125	0.44	+3.9
4,597,255	+		PS417_21125	0.68	+4.2
4,597,257	+		PS417_21125	0.68	+4.3
4,597,257	+		PS417_21125	0.68	+4.0
4,597,257	+		PS417_21125	0.68	+4.4
4,597,257	+		PS417_21125	0.68	+2.6
4,597,258	-		PS417_21125	0.68	+0.8
4,597,329	+		PS417_21125	0.78	+4.5
4,597,329	+		PS417_21125	0.78	+4.1
4,597,488	+				+0.4
4,597,507	+				-1.4
4,597,507	+				-0.5
4,597,508	-				+0.4