Strain Fitness in Pseudomonas simiae WCS417 around PS417_21100

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,591,722	+		PS417_21095	0.46	-2.2
4,591,923	+		PS417_21095	0.59	-1.3
4,591,961	+		PS417_21095	0.62	-0.3
4,591,961	+		PS417_21095	0.62	+0.6
4,591,961	+		PS417_21095	0.62	+0.7
4,592,102	+		PS417_21095	0.71	+0.8
4,592,140	-		PS417_21095	0.73	-2.0
4,592,418	+				-0.6
4,592,418	+				-2.8
4,592,418	+				+0.5
4,592,419	-				-0.6
4,592,425	+				-3.4
4,592,425	+				+2.2
4,592,545	-				+0.4
4,592,545	-				-1.8
4,592,621	+				+0.3
4,592,633	+				+1.5
4,592,633	+				+1.3
4,592,748	-		PS417_21100	0.20	-1.8
4,593,014	+		PS417_21100	0.47	+0.5
4,593,015	-		PS417_21100	0.48	-3.4
4,593,015	-		PS417_21100	0.48	-0.1
4,593,015	-		PS417_21100	0.48	-2.6
4,593,278	+		PS417_21100	0.74	-1.9
4,593,278	+		PS417_21100	0.74	-0.6
4,593,278	+		PS417_21100	0.74	-1.3
4,593,279	-		PS417_21100	0.74	-0.3
4,593,299	+		PS417_21100	0.76	-2.6
4,593,299	+		PS417_21100	0.76	-0.2
4,593,300	-		PS417_21100	0.76	-3.6
4,593,423	+		PS417_21100	0.89	+0.1
4,593,423	+		PS417_21100	0.89	-0.8
4,593,423	+		PS417_21100	0.89	-1.5
4,593,512	-				+0.1
4,593,523	-				+0.5
4,593,569	+				+0.9
4,593,569	+				-0.0
4,593,582	+				-1.2
4,593,592	+				+1.0
4,593,593	-				-1.2
4,593,593	-				-0.0
4,593,593	-				+0.0
4,593,615	+				-2.7
4,593,616	-				-0.2
4,593,648	+				-0.5
4,593,649	-				-1.7
4,593,651	-				-0.1
4,593,652	+				+1.4
4,593,652	+				+0.4
4,593,652	+				+0.7
4,593,652	+				-0.6
4,593,652	+				+1.9
4,593,652	+				+0.5
4,593,652	+				+0.1
4,593,652	+				-0.5
4,593,653	-				-2.9
4,593,653	-				-0.2
4,593,653	-				+0.6
4,593,653	-				+1.9
4,593,653	-				+1.6
4,593,768	+		PS417_21105	0.10	+0.9
4,593,768	+		PS417_21105	0.10	+2.5
4,593,768	+		PS417_21105	0.10	+0.6
4,593,769	-		PS417_21105	0.10	+0.4
4,593,769	-		PS417_21105	0.10	-1.6
4,593,769	-		PS417_21105	0.10	+1.4
4,593,917	+		PS417_21105	0.21	-2.6
4,593,926	+		PS417_21105	0.22	-0.1
4,593,927	-		PS417_21105	0.22	+0.8
4,594,008	-		PS417_21105	0.28	+0.6
4,594,008	-		PS417_21105	0.28	-0.0
4,594,148	-		PS417_21105	0.38	+0.6
4,594,214	+		PS417_21105	0.43	-1.6
4,594,215	-		PS417_21105	0.43	+0.8
4,594,215	-		PS417_21105	0.43	-3.3