Strain Fitness in Pseudomonas simiae WCS417 around PS417_20900

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,543,344	+		PS417_20895	0.20	+2.8
4,543,345	-		PS417_20895	0.20	-0.3
4,543,345	-		PS417_20895	0.20	+0.5
4,543,604	+		PS417_20895	0.51	+0.3
4,543,604	+				-1.0
4,543,604	+		PS417_20895	0.51	+0.3
4,543,604	+		PS417_20895	0.51	+0.2
4,543,604	+		PS417_20895	0.51	-1.6
4,543,604	+		PS417_20895	0.51	-2.7
4,543,604	+		PS417_20895	0.51	-0.1
4,543,605	-		PS417_20895	0.51	-1.6
4,543,605	-		PS417_20895	0.51	+1.3
4,543,605	-		PS417_20895	0.51	-0.2
4,543,605	-		PS417_20895	0.51	-0.2
4,543,605	-		PS417_20895	0.51	+0.3
4,543,605	-		PS417_20895	0.51	+1.2
4,543,605	-		PS417_20895	0.51	-0.7
4,543,605	-		PS417_20895	0.51	+0.6
4,543,605	-		PS417_20895	0.51	-3.2
4,543,605	-		PS417_20895	0.51	-2.9
4,543,605	-		PS417_20895	0.51	-0.4
4,543,605	-		PS417_20895	0.51	-0.6
4,543,605	-		PS417_20895	0.51	+1.1
4,543,605	-		PS417_20895	0.51	-1.0
4,543,606	+		PS417_20895	0.51	+0.9
4,543,606	+		PS417_20895	0.51	+1.9
4,543,607	-		PS417_20895	0.51	+1.2
4,543,607	-		PS417_20895	0.51	-2.9
4,543,677	+		PS417_20895	0.59	+0.4
4,543,932	+		PS417_20895	0.90	-0.8
4,543,932	+		PS417_20895	0.90	-1.6
4,543,932	+		PS417_20895	0.90	-3.6
4,543,932	+		PS417_20895	0.90	-2.0
4,543,933	-		PS417_20895	0.90	+0.4
4,543,935	-				-3.1
4,544,112	+				-1.6
4,544,113	-				+4.5
4,544,113	-				-0.3
4,544,113	-				-0.8
4,544,113	-				+0.9
4,544,118	+				+1.5
4,544,118	+				-1.0
4,544,118	+				-1.8
4,544,118	+				-0.5
4,544,119	-				-1.6
4,544,119	-				+0.5
4,544,224	-		PS417_20900	0.15	+0.3
4,544,331	+		PS417_20900	0.23	-0.9
4,544,331	+		PS417_20900	0.23	-0.1
4,544,331	+		PS417_20900	0.23	+0.5
4,544,331	+		PS417_20900	0.23	-0.6
4,544,331	+		PS417_20900	0.23	-0.3
4,544,332	-		PS417_20900	0.23	-2.3
4,544,332	-		PS417_20900	0.23	-0.0
4,544,332	-		PS417_20900	0.23	+0.9
4,544,547	+		PS417_20900	0.40	+0.9
4,544,548	-		PS417_20900	0.40	+1.1
4,544,715	+		PS417_20900	0.52	+0.1
4,544,716	-		PS417_20900	0.52	+2.0
4,544,716	-		PS417_20900	0.52	+1.0
4,544,802	+		PS417_20900	0.59	-0.6
4,544,802	+		PS417_20900	0.59	+0.7
4,544,802	+		PS417_20900	0.59	-2.3
4,544,803	-		PS417_20900	0.59	+2.9
4,544,803	-		PS417_20900	0.59	-0.7
4,544,803	-				-0.6
4,544,803	-		PS417_20900	0.59	+1.3
4,544,803	-		PS417_20900	0.59	+1.1
4,544,803	-		PS417_20900	0.59	-1.0
4,544,803	-		PS417_20900	0.59	+2.0
4,545,048	+		PS417_20900	0.78	+1.3
4,545,049	-		PS417_20900	0.78	+0.6
4,545,184	+		PS417_20900	0.88	-3.1
4,545,185	-		PS417_20900	0.88	-4.3
4,545,196	-		PS417_20900	0.89	-1.6
4,545,303	+				-1.5
4,545,303	+				-1.7
4,545,303	+				-1.8
4,545,399	+				-0.1
4,545,399	+				-1.8
4,545,476	+				-0.5
4,545,476	+				+0.3
4,545,476	+				-3.7
4,545,476	+				+0.9
4,545,477	-				+0.5
4,545,586	-		PS417_20905	0.15	+0.0
4,546,278	-				-2.7
4,546,281	-				-4.0
4,546,307	-				+0.3
4,546,307	-				+0.4
4,546,332	-				+0.8