Strain Fitness in Pseudomonas simiae WCS417 around PS417_20575

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,466,688	+				+0.2
4,466,688	+				+0.5
4,466,689	-				+0.5
4,466,689	-				-2.3
4,466,689	-				-1.2
4,466,742	+				+0.7
4,466,742	+				-1.8
4,466,770	+				-1.1
4,466,788	+				+1.1
4,466,808	+				-0.4
4,466,808	+				-1.3
4,466,808	+				+0.3
4,466,809	-				+2.0
4,466,809	-				+1.0
4,466,809	-				-1.3
4,466,814	+				+0.1
4,466,830	+				-3.2
4,466,830	+				+1.3
4,466,830	+				-2.0
4,466,830	+				+0.2
4,466,831	-				+0.7
4,466,831	-				-2.3
4,466,831	-				-2.2
4,466,831	-				+3.2
4,466,832	+				-1.0
4,466,832	+				+1.5
4,466,832	+				+0.8
4,466,832	+				+1.9
4,466,836	+				-0.1
4,466,918	+				+0.0
4,466,918	+				+0.3
4,466,918	+				+0.9
4,466,918	+				-2.0
4,466,969	+				-1.6
4,466,969	+				-0.9
4,467,051	+				+0.4
4,467,051	+				+1.8
4,467,051	+				+0.0
4,467,051	+				-1.0
4,467,051	+				+0.5
4,467,051	+				-1.8
4,467,051	+				+1.4
4,467,051	+				-2.4
4,467,051	+				-2.2
4,467,051	+				-2.2
4,467,051	+				+3.4
4,467,051	+				-2.2
4,467,052	-				+0.6
4,467,052	-				+0.8
4,467,052	-				-1.0
4,467,052	-				+0.2
4,467,052	-				+0.5
4,467,052	-				-0.9
4,467,052	-				+0.2
4,467,154	+				-2.2
4,467,301	-				-1.3
4,467,451	-				+1.6
4,467,708	-				-0.6
4,468,641	+		PS417_20575	0.39	-1.5
4,468,828	-		PS417_20575	0.43	-0.9
4,468,998	+		PS417_20575	0.48	-2.6
4,468,999	-		PS417_20575	0.48	-1.2
4,468,999	-		PS417_20575	0.48	-4.1
4,469,106	+		PS417_20575	0.51	-1.7
4,469,271	+		PS417_20575	0.55	-3.2
4,469,271	+		PS417_20575	0.55	-2.3
4,469,272	-		PS417_20575	0.55	-1.9
4,469,352	-		PS417_20575	0.57	-2.7
4,469,352	-		PS417_20575	0.57	-2.2
4,469,481	-		PS417_20575	0.60	-1.8
4,469,784	+		PS417_20575	0.68	-1.6
4,469,831	-		PS417_20575	0.69	-3.2
4,470,048	+		PS417_20575	0.75	+0.0
4,470,048	+		PS417_20575	0.75	-2.5
4,470,048	+		PS417_20575	0.75	-2.3
4,470,048	+		PS417_20575	0.75	-1.6
4,470,048	+		PS417_20575	0.75	-2.8
4,470,049	-		PS417_20575	0.75	-0.8
4,470,174	+		PS417_20575	0.78	-1.4
4,470,174	+		PS417_20575	0.78	-0.7
4,470,332	+		PS417_20575	0.82	-1.7
4,471,044	+				-2.0
4,471,045	-				-2.8
4,471,045	-				-1.5
4,471,048	+				-0.5
4,471,048	+				-1.4
4,471,048	+				+1.6
4,471,048	+				-2.7
4,471,048	+				-1.3
4,471,049	-				-1.0
4,471,049	-				-1.5
4,471,049	-				+1.4
4,471,050	+				-1.8
4,471,050	+				-1.1
4,471,050	+				-1.1
4,471,050	+				-1.8
4,471,050	+				-4.6
4,471,050	+				-2.5
4,471,051	-				-2.1
4,471,051	-				+0.2
4,471,051	-				+0.2
4,471,051	-				+0.4
4,471,051	-				-0.1
4,471,059	+				-0.3
4,471,063	+				-2.3
4,471,063	+				-1.6
4,471,064	-				+0.4
4,471,207	+				-0.2
4,471,207	+				+0.0
4,471,207	+				-0.5
4,471,208	-				-0.4
4,471,287	+		PS417_20580	0.10	+2.4
4,471,288	-		PS417_20580	0.10	+0.5
4,471,288	-		PS417_20580	0.10	-2.4
4,471,405	+		PS417_20580	0.17	+1.2
4,471,677	-		PS417_20580	0.33	+1.9
4,471,745	+		PS417_20580	0.37	-0.2
4,471,746	-		PS417_20580	0.37	-1.1
4,471,848	-		PS417_20580	0.43	+0.8
4,471,848	-		PS417_20580	0.43	-2.6
4,471,852	-		PS417_20580	0.43	-0.6
4,471,852	-		PS417_20580	0.43	-1.7
4,471,852	-		PS417_20580	0.43	+1.9
4,471,852	-		PS417_20580	0.43	-0.1
4,471,852	-		PS417_20580	0.43	+1.1
4,471,934	-		PS417_20580	0.48	+0.2
4,471,934	-		PS417_20580	0.48	+1.4
4,472,006	+		PS417_20580	0.52	+3.9
4,472,006	+		PS417_20580	0.52	-0.9