Strain Fitness in Pseudomonas simiae WCS417 around PS417_20505

Experiment: methylglyoxal 0.032 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.032 vol%
4,452,891	+		PS417_20500	0.76	-1.6
4,452,891	+		PS417_20500	0.76	-0.6
4,452,892	-		PS417_20500	0.76	-0.9
4,452,922	+		PS417_20500	0.82	-2.7
4,452,923	-		PS417_20500	0.83	-0.9
4,452,934	-		PS417_20500	0.85	-0.2
4,453,025	+				-0.9
4,453,088	-				-0.5
4,453,088	-				-2.1
4,453,141	-				-1.0
4,453,153	+				-0.1
4,453,154	-				+0.1
4,453,308	+				+3.2
4,453,309	-				+0.0
4,453,309	-				+1.8
4,453,309	-				-1.9
4,453,309	-				+1.5
4,453,309	-				-2.1
4,453,339	-				-0.0
4,453,392	-				+1.3
4,453,705	+				-0.5
4,453,711	+				-1.8
4,453,711	+				-1.8
4,453,711	+				-1.3
4,453,718	+				-3.0
4,453,718	+				-1.0
4,453,719	-				-3.7
4,453,722	+				+0.2
4,453,722	+				+0.7
4,453,722	+				-3.9
4,453,722	+				+0.7
4,453,722	+				-2.2
4,453,723	-				-1.2
4,453,723	-				+1.5
4,453,723	-				+0.8
4,453,723	-				-2.1
4,453,754	+				-1.8
4,453,755	-				-1.6
4,453,755	-				+0.4
4,453,801	+				-3.1
4,453,801	+				-2.2
4,453,801	+				-1.0
4,453,802	-				+0.8
4,453,843	+				+0.6
4,453,843	+				+1.1
4,453,844	-				-2.2
4,453,844	-				-3.2
4,453,866	+				-2.5
4,454,119	-		PS417_20505	0.46	-4.0
4,454,119	-		PS417_20505	0.46	+1.1
4,454,208	+		PS417_20505	0.62	+1.2
4,454,208	+		PS417_20505	0.62	-0.6
4,454,208	+		PS417_20505	0.62	-1.5
4,454,209	-		PS417_20505	0.63	-1.4
4,454,209	-		PS417_20505	0.63	+1.1
4,454,209	-		PS417_20505	0.63	-1.4
4,454,209	-		PS417_20505	0.63	-2.9
4,454,209	-		PS417_20505	0.63	+1.2
4,454,209	-		PS417_20505	0.63	-0.4
4,454,261	+		PS417_20505	0.73	+0.4
4,454,262	-		PS417_20505	0.73	-1.3
4,454,272	-		PS417_20505	0.75	-0.3
4,454,284	+		PS417_20505	0.77	+0.0
4,454,462	-				+0.9
4,454,581	+		PS417_20510	0.17	-3.2
4,454,581	+		PS417_20510	0.17	-2.5
4,454,581	+		PS417_20510	0.17	+0.8
4,454,581	+		PS417_20510	0.17	-0.8
4,454,582	-		PS417_20510	0.17	+0.4
4,454,582	-		PS417_20510	0.17	+1.0
4,454,582	-		PS417_20510	0.17	+1.0
4,454,582	-		PS417_20510	0.17	+1.4
4,454,582	-		PS417_20510	0.17	-0.4
4,454,642	+		PS417_20510	0.24	+0.8
4,454,642	+		PS417_20510	0.24	-2.0
4,454,642	+		PS417_20510	0.24	-0.1
4,454,643	-		PS417_20510	0.24	+0.3
4,454,659	-		PS417_20510	0.26	+0.2
4,454,749	+		PS417_20510	0.36	-1.3
4,454,749	+		PS417_20510	0.36	+0.1
4,454,771	+		PS417_20510	0.39	+1.0
4,454,771	+		PS417_20510	0.39	+0.8
4,454,772	-		PS417_20510	0.39	+0.6
4,454,834	+		PS417_20510	0.46	-0.0
4,454,834	+		PS417_20510	0.46	+1.9
4,454,834	+		PS417_20510	0.46	+2.2
4,454,835	-		PS417_20510	0.46	-0.1
4,454,835	-				-1.0
4,454,835	-		PS417_20510	0.46	-0.6
4,455,077	+		PS417_20510	0.74	-2.2
4,455,078	-		PS417_20510	0.74	-0.0
4,455,089	+		PS417_20510	0.75	+2.6
4,455,089	+		PS417_20510	0.75	-2.0
4,455,089	+		PS417_20510	0.75	-0.6
4,455,089	+		PS417_20510	0.75	-0.6
4,455,090	-		PS417_20510	0.75	-3.9
4,455,090	-		PS417_20510	0.75	+1.2
4,455,090	-		PS417_20510	0.75	-0.8
4,455,218	+				-1.8
4,455,218	+				-0.6
4,455,219	-				-1.3
4,455,219	-				+1.9
4,455,243	-				-0.0
4,455,293	-				-0.1
4,455,293	-				-1.5
4,455,296	+				-1.8
4,455,296	+				-3.4
4,455,297	-				-2.7
4,455,297	-				+0.4
4,455,334	-				+1.8